RNA id: AMCG00006588



Basic Information


Item Value
RNA id AMCG00006588
length 306
RNA type mRNA
GC content 0.47
exon number 1
gene id AMCG00006588
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10551428 ~ 10551733 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGATATCTGCAGCCATCATCGTCTTCATTGTGTCATTCGTCCCCTATCACATTATGATCATGACGCTCATCATCCTACGTATCCACAAGAATGTGAATATGAACAACATCAGCACCCTCTCCGCCGCCTATGAATTTCTGGAAGGGATCTGCAGCATCAGCAGCTGCCTGGACCCCATTCTTTACATCCTAGCAAGCGAGCGATTTCAAAAGAACTGGCTGGCAATGAAGCAGCACACCAAAACAATATGCTGCTTCCGCAGCACGAGACGAGTTGGAGTCATAAAAGTTACATCATCGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138687 lncRNA downstream 81368 10421561 ~ 10470060 (-) True G110733
TU138671 lncRNA downstream 246181 10304931 ~ 10305247 (-) True G110720
TU138511 lncRNA downstream 991324 9545495 ~ 9560104 (-) True G110605
TU138492 lncRNA downstream 1073922 9476482 ~ 9477506 (-) True G110594
TU138472 lncRNA downstream 1537102 9010140 ~ 9014326 (-) True G110576
TU138722 lncRNA upstream 51362 10603095 ~ 10603733 (-) True G110757
TU138921 lncRNA upstream 1119836 11671569 ~ 11672483 (-) True G110917
TU138945 lncRNA upstream 1237207 11788940 ~ 11789234 (-) True G110939
TU138946 lncRNA upstream 1238319 11790052 ~ 11793501 (-) True G110940
TU138948 lncRNA upstream 1242803 11794536 ~ 11796342 (-) True G110942
AMCG00006587 mRNA downstream 24128 10521312 ~ 10527300 (-) True AMCG00006587
AMCG00006586 mRNA downstream 40067 10506051 ~ 10511361 (-) True AMCG00006586
AMCG00006585 mRNA downstream 83722 10444225 ~ 10467706 (-) True AMCG00006585
AMCG00006583 mRNA downstream 128908 10403574 ~ 10422520 (-) True AMCG00006583
AMCG00006584 mRNA downstream 165753 10375934 ~ 10385675 (-) True AMCG00006584
AMCG00006591 mRNA upstream 87925 10639658 ~ 10653405 (-) True AMCG00006591
AMCG00006592 mRNA upstream 152340 10704073 ~ 10731630 (-) True AMCG00006592
AMCG00006597 mRNA upstream 210446 10762179 ~ 10816162 (-) True AMCG00006597
AMCG00006598 mRNA upstream 325982 10877715 ~ 10892122 (-) True AMCG00006598
AMCG00006599 mRNA upstream 355964 10907697 ~ 10917640 (-) True AMCG00006599
TU138641 other downstream 444143 10087278 ~ 10107285 (-) True AMCG00006579
TU138509 other downstream 999348 9545495 ~ 9552080 (-) False G110605
TU138464 other downstream 1552164 8997637 ~ 8999264 (-) True G110570
TU138401 other downstream 1757366 8787818 ~ 8794062 (-) True G110520
TU138386 other downstream 1827076 8722388 ~ 8724352 (-) True G110507
TU139024 other upstream 1466149 12017882 ~ 12024548 (-) False AMCG00006618
TU139089 other upstream 1585449 12137182 ~ 12140393 (-) True AMCG00006625
TU139243 other upstream 2324559 12876292 ~ 12878656 (-) False AMCG00006641
TU139244 other upstream 2324559 12876292 ~ 12878656 (-) True AMCG00006641
TU139375 other upstream 2903699 13455432 ~ 13503228 (-) True AMCG00006663

Expression Profile