RNA id: AMCG00006607


Basic Information

Item Value
RNA id AMCG00006607
length 276
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00006607
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 11550314 ~ 11551561 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGCATCATGTCAAAACTGGAACATGTGAAGTGGTAGCAATACACAGATGCTGCAACAAGAACAAGATAGAAGAAAGATCTCAGACAATAAAATGCTCCTGCTTTCCAGGGCAAGTGGCAGGGACCACACGTGCTGCACCATCGTGTGTAGATGCCTCAATTGTGGAACAGAAATGGTGGTGTCAGATGCATCCGTGTCTGGATGGAGAAGAATGTAAAGTTCTCCCCGATCTTAAAGGCTGGAGCTGTGCTACAGGGAATAAAGTAAAGACAACAA

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU138722 lncRNA downstream 946581 10603095 ~ 10603733 (-) True G110757
TU138687 lncRNA downstream 1080254 10421561 ~ 10470060 (-) True G110733
TU138671 lncRNA downstream 1245067 10304931 ~ 10305247 (-) True G110720
TU138511 lncRNA downstream 1990210 9545495 ~ 9560104 (-) True G110605
TU138492 lncRNA downstream 2072808 9476482 ~ 9477506 (-) True G110594
TU138921 lncRNA upstream 120008 11671569 ~ 11672483 (-) True G110917
TU138945 lncRNA upstream 237379 11788940 ~ 11789234 (-) True G110939
TU138946 lncRNA upstream 238491 11790052 ~ 11793501 (-) True G110940
TU138948 lncRNA upstream 242975 11794536 ~ 11796342 (-) True G110942
TU138964 lncRNA upstream 348402 11899963 ~ 11902168 (-) True G110957
AMCG00006602 mRNA downstream 319125 11213847 ~ 11231189 (-) True AMCG00006602
AMCG00006604 mRNA downstream 432448 11102085 ~ 11117866 (-) True AMCG00006604
AMCG00006605 mRNA downstream 497417 11052052 ~ 11052897 (-) True AMCG00006605
AMCG00006603 mRNA downstream 534945 10994638 ~ 11015369 (-) True AMCG00006603
AMCG00006600 mRNA downstream 605505 10935397 ~ 10944809 (-) True AMCG00006600
AMCG00006612 mRNA upstream 61034 11612595 ~ 11619824 (-) True AMCG00006612
AMCG00006613 mRNA upstream 186658 11738219 ~ 11755480 (-) True AMCG00006613
AMCG00006611 mRNA upstream 274340 11825901 ~ 11839726 (-) True AMCG00006611
AMCG00006615 mRNA upstream 356241 11907802 ~ 11931159 (-) True AMCG00006615
AMCG00006619 mRNA upstream 413707 11965268 ~ 11984815 (-) True AMCG00006619
TU138641 other downstream 1443029 10087278 ~ 10107285 (-) True AMCG00006579
TU138509 other downstream 1998234 9545495 ~ 9552080 (-) False G110605
TU138464 other downstream 2551050 8997637 ~ 8999264 (-) True G110570
TU138401 other downstream 2756252 8787818 ~ 8794062 (-) True G110520
TU138386 other downstream 2825962 8722388 ~ 8724352 (-) True G110507
TU139024 other upstream 466321 12017882 ~ 12024548 (-) False AMCG00006618
TU139089 other upstream 585621 12137182 ~ 12140393 (-) True AMCG00006625
TU139243 other upstream 1324731 12876292 ~ 12878656 (-) False AMCG00006641
TU139244 other upstream 1324731 12876292 ~ 12878656 (-) True AMCG00006641
TU139375 other upstream 1903871 13455432 ~ 13503228 (-) True AMCG00006663

Expression Profile