RNA id: AMCG00006609



Basic Information


Item Value
RNA id AMCG00006609
length 303
RNA type mRNA
GC content 0.43
exon number 2
gene id AMCG00006609
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 11734683 ~ 11735631 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgaaaacttgtttttttattcctgtCTGCATCAGGTCTTTCAAACCAGACTTTGTTCTGATTCGCCAGCATGCCTACAGCATGACCCAAGGAGAAGACTTCCGCAGCCTTGTGATTGGCCTGCAGTACGGGGGTGTCCCTGGTGTGAACTCTCTCCTCTCCATCTACAACTTCTGTAGTAAACCCTGGGTGTTTTCTCAGATGATAAAAATCTTCCATACTCTGGGTCCAGAGAAATTCCCTTtgaatgaacaaacattttaccCTAATCATAAAGAGATGGTGAGTGTTTTCCTCTCATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138920 lncRNA upstream 62235 11671569 ~ 11672448 (+) True G110916
TU138877 lncRNA upstream 384566 11349884 ~ 11350117 (+) True G110883
TU138835 lncRNA upstream 613948 11120390 ~ 11120735 (+) True G110849
TU138673 lncRNA upstream 1364752 10369715 ~ 10369931 (+) True G110722
TU138618 lncRNA upstream 1702837 10030426 ~ 10031846 (+) True G110681
TU138936 lncRNA downstream 57537 11793168 ~ 11793535 (+) True G110930
TU139023 lncRNA downstream 287179 12022810 ~ 12024549 (+) True G111008
TU139091 lncRNA downstream 450977 12186608 ~ 12187768 (+) False AMCG00006624
TU139099 lncRNA downstream 615126 12350757 ~ 12353363 (+) True G111063
TU139186 lncRNA downstream 885078 12620709 ~ 12629968 (+) True AMCG00006636
AMCG00006610 mRNA upstream 27859 11658887 ~ 11706824 (+) True AMCG00006610
AMCG00006606 mRNA upstream 412710 11305891 ~ 11321973 (+) True AMCG00006606
AMCG00006601 mRNA upstream 615214 11116560 ~ 11119469 (+) True AMCG00006601
AMCG00006594 mRNA upstream 861126 10856045 ~ 10873557 (+) True AMCG00006594
AMCG00006593 mRNA upstream 905174 10828315 ~ 10829509 (+) True AMCG00006593
AMCG00006608 mRNA downstream 38355 11773986 ~ 11790179 (+) True AMCG00006608
AMCG00006614 mRNA downstream 148306 11883937 ~ 11902046 (+) True AMCG00006614
AMCG00006617 mRNA downstream 251829 11987460 ~ 12000919 (+) True AMCG00006617
AMCG00006620 mRNA downstream 277455 12013086 ~ 12014321 (+) True AMCG00006620
AMCG00006616 mRNA downstream 296024 12031655 ~ 12054027 (+) True AMCG00006616
TU138516 other upstream 2167332 9566213 ~ 9567351 (+) False AMCG00006565
TU138383 other upstream 3010617 8722450 ~ 8724066 (+) True AMCG00006552
TU138304 other upstream 3557897 8175760 ~ 8176786 (+) True G110445
TU138093 other upstream 4079489 7653672 ~ 7655194 (+) True G110279
TU137929 other upstream 4822429 6911876 ~ 6912254 (+) True G110163
TU139270 other downstream 1275553 13011184 ~ 13043448 (+) True G111197
TU140941 other downstream 9201866 20937497 ~ 20938170 (+) False AMCG00006811
TU140974 other downstream 9312705 21048336 ~ 21049038 (+) True G112567
TU141018 other downstream 9407234 21142865 ~ 21203201 (+) True G112600
TU141703 other downstream 12296482 24032113 ~ 24036112 (+) False AMCG00006878

Expression Profile