Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006638 |
| length | 1482 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 1 |
| gene id | AMCG00006638 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 12651939 ~ 12653420 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0051260 | protein homooligomerization | biological_process |
| GO:0008076 | voltage-gated potassium channel complex | cellular_component |
| GO:0005249 | voltage-gated potassium channel activity | molecular_function |
| id | description |
|---|---|
| K04874 | KCNA1, KV1.1; potassium voltage-gated channel Shaker-related subfamily A member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU139186 | lncRNA | upstream | 21971 | 12620709 ~ 12629968 (+) | True | AMCG00006636 |
| TU139099 | lncRNA | upstream | 298576 | 12350757 ~ 12353363 (+) | True | G111063 |
| TU139091 | lncRNA | upstream | 464171 | 12186608 ~ 12187768 (+) | False | AMCG00006624 |
| TU139023 | lncRNA | upstream | 627390 | 12022810 ~ 12024549 (+) | True | G111008 |
| TU138936 | lncRNA | upstream | 858404 | 11793168 ~ 11793535 (+) | True | G110930 |
| TU139201 | lncRNA | downstream | 106151 | 12759571 ~ 12760841 (+) | True | G111148 |
| TU139202 | lncRNA | downstream | 106151 | 12759571 ~ 12760841 (+) | False | G111148 |
| TU139203 | lncRNA | downstream | 106151 | 12759571 ~ 12770925 (+) | False | G111148 |
| TU139223 | lncRNA | downstream | 192503 | 12845923 ~ 12847502 (+) | True | G111161 |
| TU139325 | lncRNA | downstream | 700536 | 13353956 ~ 13357071 (+) | True | G111240 |
| AMCG00006636 | mRNA | upstream | 124 | 12620062 ~ 12651815 (+) | False | AMCG00006636 |
| AMCG00006639 | mRNA | upstream | 32992 | 12617517 ~ 12618947 (+) | True | AMCG00006639 |
| AMCG00006635 | mRNA | upstream | 111931 | 12530340 ~ 12540008 (+) | True | AMCG00006635 |
| AMCG00006632 | mRNA | upstream | 220895 | 12425206 ~ 12431044 (+) | True | AMCG00006632 |
| AMCG00006631 | mRNA | upstream | 264435 | 12381327 ~ 12387504 (+) | True | AMCG00006631 |
| AMCG00006640 | mRNA | downstream | 61060 | 12714480 ~ 12716165 (+) | True | AMCG00006640 |
| AMCG00006646 | mRNA | downstream | 230356 | 12883776 ~ 12888236 (+) | True | AMCG00006646 |
| AMCG00006645 | mRNA | downstream | 284906 | 12938326 ~ 12954435 (+) | True | AMCG00006645 |
| AMCG00006650 | mRNA | downstream | 362233 | 13015653 ~ 13035434 (+) | True | AMCG00006650 |
| AMCG00006653 | mRNA | downstream | 383253 | 13036673 ~ 13037830 (+) | True | AMCG00006653 |
| TU138516 | other | upstream | 3084588 | 9566213 ~ 9567351 (+) | False | AMCG00006565 |
| TU138383 | other | upstream | 3927873 | 8722450 ~ 8724066 (+) | True | AMCG00006552 |
| TU138304 | other | upstream | 4475153 | 8175760 ~ 8176786 (+) | True | G110445 |
| TU138093 | other | upstream | 4996745 | 7653672 ~ 7655194 (+) | True | G110279 |
| TU137929 | other | upstream | 5739685 | 6911876 ~ 6912254 (+) | True | G110163 |
| TU139270 | other | downstream | 357764 | 13011184 ~ 13043448 (+) | True | G111197 |
| TU140941 | other | downstream | 8284077 | 20937497 ~ 20938170 (+) | False | AMCG00006811 |
| TU140974 | other | downstream | 8394916 | 21048336 ~ 21049038 (+) | True | G112567 |
| TU141018 | other | downstream | 8489445 | 21142865 ~ 21203201 (+) | True | G112600 |
| TU141703 | other | downstream | 11378693 | 24032113 ~ 24036112 (+) | False | AMCG00006878 |
