Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006654 |
| length | 1314 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 11 |
| gene id | AMCG00006654 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 13087455 ~ 13141147 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0035023 | regulation of Rho protein signal transduction | biological_process |
| id | description |
|---|---|
| K23798 | ARHGEF39; Rho guanine nucleotide exchange factor 39 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU139248 | lncRNA | downstream | 127827 | 12954610 ~ 12959628 (-) | True | G111182 |
| TU139217 | lncRNA | downstream | 326619 | 12759571 ~ 12760836 (-) | True | G111158 |
| TU139218 | lncRNA | downstream | 326619 | 12759571 ~ 12760836 (-) | False | G111158 |
| TU139067 | lncRNA | downstream | 957072 | 12071390 ~ 12130383 (-) | False | AMCG00006622 |
| TU139038 | lncRNA | downstream | 1032500 | 12049609 ~ 12054955 (-) | False | AMCG00006621 |
| TU139505 | lncRNA | upstream | 862606 | 14003753 ~ 14004141 (-) | True | G111389 |
| TU139544 | lncRNA | upstream | 995181 | 14136328 ~ 14137746 (-) | True | G111421 |
| TU139577 | lncRNA | upstream | 1026984 | 14168131 ~ 14214816 (-) | True | G111448 |
| TU139581 | lncRNA | upstream | 1041634 | 14182781 ~ 14299856 (-) | False | G111451 |
| TU139582 | lncRNA | upstream | 1044461 | 14185608 ~ 14223328 (-) | False | G111451 |
| AMCG00006652 | mRNA | downstream | 25527 | 13056888 ~ 13061928 (-) | True | AMCG00006652 |
| AMCG00006651 | mRNA | downstream | 38135 | 13041100 ~ 13049320 (-) | True | AMCG00006651 |
| AMCG00006648 | mRNA | downstream | 63433 | 12998449 ~ 13024022 (-) | True | AMCG00006648 |
| AMCG00006649 | mRNA | downstream | 96074 | 12990803 ~ 12991381 (-) | True | AMCG00006649 |
| AMCG00006647 | mRNA | downstream | 99655 | 12961169 ~ 12987800 (-) | True | AMCG00006647 |
| AMCG00006658 | mRNA | upstream | 212537 | 13353684 ~ 13357478 (-) | True | AMCG00006658 |
| AMCG00006657 | mRNA | upstream | 251758 | 13392905 ~ 13405015 (-) | True | AMCG00006657 |
| AMCG00006660 | mRNA | upstream | 273592 | 13414739 ~ 13417932 (-) | True | AMCG00006660 |
| AMCG00006663 | mRNA | upstream | 342117 | 13483264 ~ 13502534 (-) | False | AMCG00006663 |
| AMCG00006661 | mRNA | upstream | 388228 | 13529375 ~ 13532102 (-) | True | AMCG00006661 |
| TU139243 | other | downstream | 208799 | 12876292 ~ 12878656 (-) | False | AMCG00006641 |
| TU139244 | other | downstream | 208799 | 12876292 ~ 12878656 (-) | True | AMCG00006641 |
| TU139089 | other | downstream | 947062 | 12137182 ~ 12140393 (-) | True | AMCG00006625 |
| TU139024 | other | downstream | 1062907 | 12017882 ~ 12024548 (-) | False | AMCG00006618 |
| TU138641 | other | downstream | 2980170 | 10087278 ~ 10107285 (-) | True | AMCG00006579 |
| TU139375 | other | upstream | 314285 | 13455432 ~ 13503228 (-) | True | AMCG00006663 |
| TU139625 | other | upstream | 1219081 | 14360228 ~ 14364422 (-) | True | G111489 |
| TU139783 | other | upstream | 1584504 | 14725651 ~ 14753970 (-) | False | G111621 |
| TU139786 | other | upstream | 1584504 | 14725651 ~ 14753970 (-) | False | G111621 |
| TU139946 | other | upstream | 2611674 | 15752821 ~ 15753235 (-) | True | G111767 |
