RNA id: AMCG00006693


Basic Information

Item Value
RNA id AMCG00006693
length 468
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00006693
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14549343 ~ 14573412 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGAAGATCAGGGTGTCCTATGAGTACTCGGAGGCGGAGGACAAAAGCATCCGACTCGGGCTGTTTCTGATCGTGTGCGGCGTGGTGTCGCTCTTCATCCTGGGCTTCTGCTGGCTCAATCCCACCCTGCAGAACATGCAGTGCAAGAGCGCCAACTGCACGGTGATCTCGGTGCAGCAGAACGGGGAGATGTTCGAGTGCCCCTTCAGCTGCGGGGCGGACTGCCGGGGCACCTCCCTGTACCCCTGCCTGCAGATCTACGTCAACAACTCCGAGTCCAACTCCAAGGCTCTGCTGCATTACAACGAGCAGCAGCTGGTCATGAACCCCAAGTGTTCGTACATTCCTCCCTGTGAGCGAGACAACCAGAAAAACTCTGAGAAGGTTCTGATGTTGCAGGGTTACTGGACAGAAGAGATAAGTTCCCAGTCCTTCACCTGCTTCTTTAACCGGCACAGGAGGTGA

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0015269 calcium-activated potassium channel activity molecular_function

KEGG:

id description
K04941 KCNMB4; potassium large conductance calcium-activated channel subfamily M beta member 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU139569 lncRNA upstream 237319 14311752 ~ 14312024 (+) True G111443
TU139542 lncRNA upstream 411599 14136319 ~ 14137744 (+) True G111420
TU139484 lncRNA upstream 613089 13933666 ~ 13936254 (+) False AMCG00006672
TU139371 lncRNA upstream 1046772 13458039 ~ 13502571 (+) True G111272
TU139325 lncRNA upstream 1192272 13353956 ~ 13357071 (+) True G111240
TU139679 lncRNA downstream 55314 14628726 ~ 14632980 (+) True G111531
TU139714 lncRNA downstream 162790 14736202 ~ 14737639 (+) True G111562
TU139796 lncRNA downstream 221306 14794718 ~ 14794949 (+) True G111629
TU139802 lncRNA downstream 235836 14809248 ~ 14811063 (+) True G111635
TU139812 lncRNA downstream 320387 14893799 ~ 14895938 (+) True G111645
AMCG00006692 mRNA upstream 7997 14514304 ~ 14541346 (+) True AMCG00006692
AMCG00006688 mRNA upstream 83457 14450266 ~ 14465886 (+) True AMCG00006688
AMCG00006689 mRNA upstream 107707 14425769 ~ 14441636 (+) True AMCG00006689
AMCG00006691 mRNA upstream 154126 14394046 ~ 14395217 (+) True AMCG00006691
AMCG00006685 mRNA upstream 172542 14369813 ~ 14376801 (+) True AMCG00006685
AMCG00006694 mRNA downstream 1269 14574681 ~ 14576272 (+) True AMCG00006694
AMCG00006697 mRNA downstream 198039 14771451 ~ 14780474 (+) True AMCG00006697
AMCG00006701 mRNA downstream 290402 14863814 ~ 14891825 (+) True AMCG00006701
AMCG00006700 mRNA downstream 357611 14931023 ~ 14937252 (+) True AMCG00006700
AMCG00006699 mRNA downstream 374759 14948171 ~ 14963480 (+) True AMCG00006699
TU139270 other upstream 1505895 13011184 ~ 13043448 (+) True G111197
TU138516 other upstream 4981992 9566213 ~ 9567351 (+) False AMCG00006565
TU138383 other upstream 5825277 8722450 ~ 8724066 (+) True AMCG00006552
TU138304 other upstream 6372557 8175760 ~ 8176786 (+) True G110445
TU138093 other upstream 6894149 7653672 ~ 7655194 (+) True G110279
TU140941 other downstream 6364085 20937497 ~ 20938170 (+) False AMCG00006811
TU140974 other downstream 6474924 21048336 ~ 21049038 (+) True G112567
TU141018 other downstream 6569453 21142865 ~ 21203201 (+) True G112600
TU141703 other downstream 9458701 24032113 ~ 24036112 (+) False AMCG00006878
TU141783 other downstream 9731367 24304779 ~ 24335916 (+) False AMCG00006884

Expression Profile