RNA id: AMCG00006707


Basic Information

Item Value
RNA id AMCG00006707
length 540
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00006707
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15627216 ~ 15631171 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCAAGCTCGACGACAACGAGAGGATAATCCTCAACGTGGGGGGGACCAGGCACGAAACCTACCGCAACACCCTGAAAACCTTGCCGGGGACACGGCTGGCTCTGCTCGCCTCCGAGTCCGACACAGAGTCCGGCGTGGACTCGCAGCAACAAGTCTCGGGCTACATCGAGTACAACCCGAAGAACAACGAGTACTTTTTCGACCGCCACCCGGGGGTGTTTGCTTATGTGCTCAACTACTACAGGACCGGGAAACTTCACTGCCCGGCGGATGTGTGCGGTCCGCTCTTCGAGGAAGAGTTGGCTTTCTGGGGGATTGATGAGACCGATGTGGAGCCCTGCTGCTGGATGACCTACCGGCAGCACCGGGATGCCGAGGAGGCGCTCGATATATTTGAGATCAGCGGAGAGCCGGGGCCTGGAGACGGGGAGGAAGATGAATTGAGTAAGAGGCTGGGCATTGAGGACGTGCTGTCCCCCGAAGGCAATGTCAGCCGCTGGAAAAAGTGGCAACCGGTTAAAGATCCCAGAGCCTGA

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005251 delayed rectifier potassium channel activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU139903 lncRNA downstream 69015 15557943 ~ 15558201 (-) True G111730
TU139901 lncRNA downstream 89380 15537476 ~ 15537836 (-) True G111728
TU139797 lncRNA downstream 832267 14794718 ~ 14794949 (-) True G111630
TU139793 lncRNA downstream 893045 14733170 ~ 14734171 (-) True G111626
TU139788 lncRNA downstream 896747 14729700 ~ 14730469 (-) False G111622
TU139912 lncRNA upstream 26827 15657998 ~ 15659412 (-) True G111736
TU139937 lncRNA upstream 97442 15728613 ~ 15729533 (-) True G111759
TU139944 lncRNA upstream 111275 15742446 ~ 15742715 (-) True G111765
TU140035 lncRNA upstream 249959 15881130 ~ 15896843 (-) False AMCG00006719
TU140185 lncRNA upstream 1231506 16862677 ~ 16862967 (-) True G111940
AMCG00006706 mRNA downstream 52461 15564599 ~ 15574755 (-) True AMCG00006706
AMCG00006702 mRNA downstream 699874 14905548 ~ 14927342 (-) True AMCG00006702
AMCG00006698 mRNA downstream 808700 14808861 ~ 14818516 (-) True AMCG00006698
AMCG00006696 mRNA downstream 961417 14644607 ~ 14665799 (-) True AMCG00006696
AMCG00006695 mRNA downstream 994445 14586749 ~ 14632771 (-) True AMCG00006695
AMCG00006711 mRNA upstream 55521 15686692 ~ 15691047 (-) True AMCG00006711
AMCG00006712 mRNA upstream 71203 15702374 ~ 15704607 (-) True AMCG00006712
AMCG00006718 mRNA upstream 103494 15734665 ~ 15735290 (-) True AMCG00006718
AMCG00006717 mRNA upstream 104127 15735298 ~ 15739448 (-) True AMCG00006717
AMCG00006715 mRNA upstream 125111 15756282 ~ 15765276 (-) True AMCG00006715
TU139783 other downstream 873246 14725651 ~ 14753970 (-) False G111621
TU139786 other downstream 873246 14725651 ~ 14753970 (-) False G111621
TU139625 other downstream 1262794 14360228 ~ 14364422 (-) True G111489
TU139375 other downstream 2123988 13455432 ~ 13503228 (-) True AMCG00006663
TU139244 other downstream 2748560 12876292 ~ 12878656 (-) True AMCG00006641
TU139946 other upstream 121650 15752821 ~ 15753235 (-) True G111767
TU140351 other upstream 2001720 17632891 ~ 17633445 (-) True G112059
TU140430 other upstream 2708099 18339270 ~ 18341210 (-) False AMCG00006754
TU140642 other upstream 4002066 19633237 ~ 19635925 (-) False AMCG00006774
TU140776 other upstream 4604685 20235856 ~ 20236206 (-) True G112420

Expression Profile