Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006727 |
| length | 807 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | AMCG00006727 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 16658295 ~ 16677242 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006810 | transport | biological_process |
| GO:0008021 | synaptic vesicle | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005215 | transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU139968 | lncRNA | upstream | 788494 | 15849921 ~ 15869801 (+) | True | G111788 |
| TU139965 | lncRNA | upstream | 873533 | 15784519 ~ 15784762 (+) | True | G111786 |
| TU139943 | lncRNA | upstream | 915643 | 15742438 ~ 15742652 (+) | True | G111764 |
| TU139900 | lncRNA | upstream | 1120454 | 15537429 ~ 15537841 (+) | True | G111727 |
| TU139899 | lncRNA | upstream | 1181581 | 15476154 ~ 15476714 (+) | True | G111726 |
| TU140129 | lncRNA | downstream | 37576 | 16714818 ~ 16722048 (+) | True | G111898 |
| TU140142 | lncRNA | downstream | 102160 | 16779402 ~ 16804582 (+) | False | G111909 |
| TU140140 | lncRNA | downstream | 123603 | 16800845 ~ 16810470 (+) | True | G111909 |
| TU140186 | lncRNA | downstream | 185914 | 16863156 ~ 16863355 (+) | True | G111941 |
| TU140403 | lncRNA | downstream | 1537551 | 18214793 ~ 18215048 (+) | True | G112106 |
| AMCG00006726 | mRNA | upstream | 233089 | 16377780 ~ 16425206 (+) | True | AMCG00006726 |
| AMCG00006725 | mRNA | upstream | 301871 | 16354450 ~ 16356424 (+) | True | AMCG00006725 |
| AMCG00006724 | mRNA | upstream | 313279 | 16335110 ~ 16345016 (+) | True | AMCG00006724 |
| AMCG00006721 | mRNA | upstream | 627411 | 15999396 ~ 16030884 (+) | True | AMCG00006721 |
| AMCG00006713 | mRNA | upstream | 859633 | 15767111 ~ 15798662 (+) | True | AMCG00006713 |
| AMCG00006728 | mRNA | downstream | 18223 | 16695465 ~ 16698111 (+) | True | AMCG00006728 |
| AMCG00006729 | mRNA | downstream | 221039 | 16898281 ~ 16901493 (+) | True | AMCG00006729 |
| AMCG00006730 | mRNA | downstream | 226278 | 16903520 ~ 16940186 (+) | True | AMCG00006730 |
| AMCG00006731 | mRNA | downstream | 263020 | 16940262 ~ 16947460 (+) | True | AMCG00006731 |
| AMCG00006732 | mRNA | downstream | 277646 | 16954888 ~ 17022710 (+) | True | AMCG00006732 |
| TU139270 | other | upstream | 3614847 | 13011184 ~ 13043448 (+) | True | G111197 |
| TU138516 | other | upstream | 7090944 | 9566213 ~ 9567351 (+) | False | AMCG00006565 |
| TU138383 | other | upstream | 7934229 | 8722450 ~ 8724066 (+) | True | AMCG00006552 |
| TU138304 | other | upstream | 8481509 | 8175760 ~ 8176786 (+) | True | G110445 |
| TU138093 | other | upstream | 9003101 | 7653672 ~ 7655194 (+) | True | G110279 |
| TU140941 | other | downstream | 4260255 | 20937497 ~ 20938170 (+) | False | AMCG00006811 |
| TU140974 | other | downstream | 4371094 | 21048336 ~ 21049038 (+) | True | G112567 |
| TU141018 | other | downstream | 4465623 | 21142865 ~ 21203201 (+) | True | G112600 |
| TU141703 | other | downstream | 7354871 | 24032113 ~ 24036112 (+) | False | AMCG00006878 |
| TU141783 | other | downstream | 7627537 | 24304779 ~ 24335916 (+) | False | AMCG00006884 |
