RNA id: AMCG00006750


Basic Information

Item Value
RNA id AMCG00006750
length 366
RNA type mRNA
GC content 0.42
exon number 2
gene id AMCG00006750
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 17963401 ~ 17964771 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGAATAAACAAAGGCTCCCCATTTGGAAGGCATCGTTGCTAAACATGTGCAGGCTCATAAATAATCTGAATAGGCAAGGAGAGGATGTGTGGACAAGTGATGAAGAGGGGGTCGTCTCAAGGGAACAATTTTCAACACTTCCAGATAGCTTCAGCTTAGAGACACTGGAGGAATTTTATCAACTCCAAAAGCTCTGTAGAATACTGCAGCCAAGGGAgAAGACGGAGGACTATTTGGACCAGGAccattcagattttaaaaatgagggACCACTAAAGAGGAAATCaccatatattttgaaaaggcaGTTGCACATTAACAAACCCAGAAGACCATACATCCTGAAACGAAGCACCTTTTACTGA

Function

GO: NA

KEGG:

id description
K05235 NTS; neurotensin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU140186 lncRNA upstream 1100046 16863156 ~ 16863355 (+) True G111941
TU140140 lncRNA upstream 1152931 16800845 ~ 16810470 (+) True G111909
TU140142 lncRNA upstream 1158819 16779402 ~ 16804582 (+) False G111909
TU140129 lncRNA upstream 1241353 16714818 ~ 16722048 (+) True G111898
TU139968 lncRNA upstream 2093600 15849921 ~ 15869801 (+) True G111788
TU140403 lncRNA downstream 250022 18214793 ~ 18215048 (+) True G112106
TU140493 lncRNA downstream 729107 18693878 ~ 18694311 (+) True G112181
TU140495 lncRNA downstream 730388 18695159 ~ 18745217 (+) True G112182
TU140496 lncRNA downstream 730388 18695159 ~ 18744463 (+) False G112182
TU140528 lncRNA downstream 936168 18900939 ~ 18903543 (+) True G112207
AMCG00006751 mRNA upstream 21177 17938902 ~ 17942224 (+) True AMCG00006751
AMCG00006748 mRNA upstream 98743 17860132 ~ 17864658 (+) True AMCG00006748
AMCG00006749 mRNA upstream 108011 17817815 ~ 17855390 (+) True AMCG00006749
AMCG00006744 mRNA upstream 398763 17537677 ~ 17564638 (+) True AMCG00006744
AMCG00006742 mRNA upstream 497266 17407029 ~ 17466135 (+) True AMCG00006742
AMCG00006753 mRNA downstream 352922 18317693 ~ 18339457 (+) True AMCG00006753
AMCG00006752 mRNA downstream 403893 18368664 ~ 18400191 (+) True AMCG00006752
AMCG00006769 mRNA downstream 1572562 19537333 ~ 19541966 (+) True AMCG00006769
AMCG00006772 mRNA downstream 1590632 19555403 ~ 19568758 (+) True AMCG00006772
AMCG00006770 mRNA downstream 1646548 19611319 ~ 19621286 (+) True AMCG00006770
TU139270 other upstream 4919953 13011184 ~ 13043448 (+) True G111197
TU138516 other upstream 8396050 9566213 ~ 9567351 (+) False AMCG00006565
TU138383 other upstream 9239335 8722450 ~ 8724066 (+) True AMCG00006552
TU138304 other upstream 9786615 8175760 ~ 8176786 (+) True G110445
TU138093 other upstream 10308207 7653672 ~ 7655194 (+) True G110279
TU140941 other downstream 2972726 20937497 ~ 20938170 (+) False AMCG00006811
TU140974 other downstream 3083565 21048336 ~ 21049038 (+) True G112567
TU141018 other downstream 3178094 21142865 ~ 21203201 (+) True G112600
TU141703 other downstream 6067342 24032113 ~ 24036112 (+) False AMCG00006878
TU141783 other downstream 6340008 24304779 ~ 24335916 (+) False AMCG00006884

Expression Profile