RNA id: AMCG00006751



Basic Information


Item Value
RNA id AMCG00006751
length 627
RNA type mRNA
GC content 0.49
exon number 4
gene id AMCG00006751
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 17938902 ~ 17942224 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTCGTGAGAATCTTCAGCTTGGCTCGGCTGCTTCGAGTTTCCAAACTCTGGAGGTTCTTTAGTGAATGTGAACAGCTGAATCAGCTGGAAGACTACATGACTTACAAGAAACTGTTGAGAGACCTGCGGACTTGGATATCCAATTACTACCAGGCCAGATACCAGGGCAAGTGGTTTGATGAAGCGGACATTTATAAACTGGTCTCCAAATCCTTGAGAGAGGAGATTGTAAATGTCCATTGTGGAAACGTGCTGAACAGCGTCCCGATGTTCAGAAATCGGGATGTGAATTTCATCAACGGTCTGCTGTTGAAACTGTGCAGAGAAGTGTTTCAGGAAGGGGACATCATCACTCATCCGAATGCCCCCGGAGATCGCATGTTCTTCATTGAGCGCAGCAGAGCCGTGGCCACCACAGGCACTTTCCACAGGGAGTTGTCTGATGGGGACTGTTTTGGAGagctCTGTCTCCTGGCCAAGGGACATCGGACGGCGACAGTGCAGGCCATGTGTCTGTATAAGCTGTACTCGCTGTCCGCTGTGAGCTTCCAGGAAGTCCTGCAGGGATTCCCAAAGATTAGGCAGTATCTGGATCAGACCGAAAACGAGAGGCTGCTTTTTTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU140186 lncRNA upstream 1075547 16863156 ~ 16863355 (+) True G111941
TU140140 lncRNA upstream 1128432 16800845 ~ 16810470 (+) True G111909
TU140142 lncRNA upstream 1134320 16779402 ~ 16804582 (+) False G111909
TU140129 lncRNA upstream 1216854 16714818 ~ 16722048 (+) True G111898
TU139968 lncRNA upstream 2069101 15849921 ~ 15869801 (+) True G111788
TU140403 lncRNA downstream 272569 18214793 ~ 18215048 (+) True G112106
TU140493 lncRNA downstream 751654 18693878 ~ 18694311 (+) True G112181
TU140495 lncRNA downstream 752935 18695159 ~ 18745217 (+) True G112182
TU140496 lncRNA downstream 752935 18695159 ~ 18744463 (+) False G112182
TU140528 lncRNA downstream 958715 18900939 ~ 18903543 (+) True G112207
AMCG00006748 mRNA upstream 74244 17860132 ~ 17864658 (+) True AMCG00006748
AMCG00006749 mRNA upstream 83512 17817815 ~ 17855390 (+) True AMCG00006749
AMCG00006744 mRNA upstream 374264 17537677 ~ 17564638 (+) True AMCG00006744
AMCG00006742 mRNA upstream 472767 17407029 ~ 17466135 (+) True AMCG00006742
AMCG00006738 mRNA upstream 795462 17137157 ~ 17143440 (+) True AMCG00006738
AMCG00006750 mRNA downstream 21177 17963401 ~ 17964771 (+) True AMCG00006750
AMCG00006753 mRNA downstream 375469 18317693 ~ 18339457 (+) True AMCG00006753
AMCG00006752 mRNA downstream 426440 18368664 ~ 18400191 (+) True AMCG00006752
AMCG00006769 mRNA downstream 1595109 19537333 ~ 19541966 (+) True AMCG00006769
AMCG00006772 mRNA downstream 1613179 19555403 ~ 19568758 (+) True AMCG00006772
TU139270 other upstream 4895454 13011184 ~ 13043448 (+) True G111197
TU138516 other upstream 8371551 9566213 ~ 9567351 (+) False AMCG00006565
TU138383 other upstream 9214836 8722450 ~ 8724066 (+) True AMCG00006552
TU138304 other upstream 9762116 8175760 ~ 8176786 (+) True G110445
TU138093 other upstream 10283708 7653672 ~ 7655194 (+) True G110279
TU140941 other downstream 2995273 20937497 ~ 20938170 (+) False AMCG00006811
TU140974 other downstream 3106112 21048336 ~ 21049038 (+) True G112567
TU141018 other downstream 3200641 21142865 ~ 21203201 (+) True G112600
TU141703 other downstream 6089889 24032113 ~ 24036112 (+) False AMCG00006878
TU141783 other downstream 6362555 24304779 ~ 24335916 (+) False AMCG00006884

Expression Profile