RNA id: AMCG00006759


Basic Information

Item Value
RNA id AMCG00006759
length 1383
RNA type mRNA
GC content 0.46
exon number 14
gene id AMCG00006759
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 18536049 ~ 18603662 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGTCAAGGTCCATAACATGAATTCCAGTCACCAGACAGAGATGATTATGATTGATGAAACCAGCCCAGAAAGTATGGAAGACATATGTGAAAGCAGATCACAGGGGGATCTCATGTATAGTATTAATGATAGACCACCATGGTACCTGTGCATCTTGCTTGGTTTCCAGCATTATATCCTGGCTTTTGGTGGCATTGTCGCCATCCCACTCATTTTGGCGGAACCTCTGTGCATTCAAGACAACAATGCAGCTAAAAGCCAGCTCATCAGCACCATATTCTTTGTCTCAGGCGTGTACACAATACTCCAGACAACTTTCGGGACTAGGTCATTGCCTATTCTTCAAGGGGGCACGTTCAGCTTTCTCACCCCTACACTGGCCATTCTAGAAATGCCCCGACCAGAATGCAACATTCAAGGAGCCATTCTGATAGCGTGTTTGCTGCAGATAGTGCTGGGCTTCTCAGGTCTTGTTGGCTGTGTCCTAAGGTTTATTGGCCCCTTAGCTATTGCTCCCACCATAAACCTCATTGGACTTTCCCTTTTCCTAGAGGCTGGGAAGAAGTCTGGAGGCCATTGGGGAATTGCTGCCTTGACAGTGGGTCTAATTCTTCTCTTCTCTCAGTATCTGAGTAAAGTTGATGTCCCATTACTTGCCTACACAGAGAAGAAATGGAAGGTTATCCGATACCCTCTATTCAAACTCTTTTCAGTAAGTCAATGGGGTCTCCCGACTGTGAGTCTGGCTTCTGTGCTTGGCATGATGGCGGGTGTCATCGCTTCAACCATGGAGTCAATCGGGGATTATTATGCATGTGCCTGTCTTTCAGGggccccacccccacccccacccactcATGCCATCAACCGTGGAATAGCAATAGAAGGGATTGGATGCTTTTTAGCAGCCATCTGGGGAATTATTGGAGGAATGTTCTTGGTTATGTTTGGAATGATTGTAGCTGTCGGAATATCTAACCTTCAGTATGTGGACTTGAATTCTTCAAGGAATTTGCTGATCTTGGGATTTTCAACCTTCAGTGGACTAGTTCTTCCGACCTGGTTTCAATCAAATCCTGGAATCATTGACACAGGAGTCAAAGAATTGGACCAAGTTATAACAGTGCTCTTTACCACTCATGTTTATTGGAGGTTTCTTTGgatttattttggacaatacTATGCCAGcattgcttttgttttaaatcttctaggcacagaaaaggaaagagggaTTAAAGCTTGGCGTGAACAAGCTGTCAACAGACTAGAGTGGTGTCTCTTGGTCCAAGCCTCTGATGTGGATGGACTGAATGAGGAGGAAAGAGTTGAGGATTACAGGCCGCTTTGGGCTCTGTCTGCCTCGGAGTATGTATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU140448 lncRNA downstream 127272 18399263 ~ 18408777 (-) True G112140
TU140283 lncRNA downstream 1208463 17108977 ~ 17327586 (-) True G112020
TU140287 lncRNA downstream 1400533 17128317 ~ 17135516 (-) True G112024
TU140194 lncRNA downstream 1634512 16898419 ~ 16901537 (-) False G111945
TU140193 lncRNA downstream 1636156 16898419 ~ 16899893 (-) False G111945
TU140510 lncRNA upstream 91410 18695072 ~ 18744463 (-) True G112195
TU140511 lncRNA upstream 91410 18695072 ~ 18745217 (-) False G112195
TU140523 lncRNA upstream 279966 18883628 ~ 18886046 (-) False G112205
TU140524 lncRNA upstream 279966 18883628 ~ 18886046 (-) True G112205
TU140596 lncRNA upstream 805157 19408819 ~ 19418420 (-) True G112270
AMCG00006755 mRNA downstream 49885 18415916 ~ 18486164 (-) True AMCG00006755
AMCG00006754 mRNA downstream 169487 18339536 ~ 18366562 (-) True AMCG00006754
AMCG00006756 mRNA downstream 198997 18218916 ~ 18337052 (-) True AMCG00006756
AMCG00006757 mRNA downstream 317600 18218173 ~ 18218449 (-) True AMCG00006757
AMCG00006747 mRNA downstream 544150 17988029 ~ 17991899 (-) True AMCG00006747
AMCG00006758 mRNA upstream 38722 18642384 ~ 18646768 (-) True AMCG00006758
AMCG00006760 mRNA upstream 49842 18653504 ~ 18688236 (-) True AMCG00006760
AMCG00006761 mRNA upstream 93079 18696741 ~ 18712396 (-) True AMCG00006761
AMCG00006766 mRNA upstream 283943 18887605 ~ 18903547 (-) True AMCG00006766
AMCG00006762 mRNA upstream 311340 18915002 ~ 18920800 (-) True AMCG00006762
TU140430 other downstream 194839 18339270 ~ 18341210 (-) False AMCG00006754
TU140351 other downstream 902604 17632891 ~ 17633445 (-) True G112059
TU139946 other downstream 2782814 15752821 ~ 15753235 (-) True G111767
TU139783 other downstream 3782079 14725651 ~ 14753970 (-) False G111621
TU140642 other upstream 1029575 19633237 ~ 19635925 (-) False AMCG00006774
TU140776 other upstream 1632194 20235856 ~ 20236206 (-) True G112420
TU140946 other upstream 2250395 20854057 ~ 20949836 (-) False AMCG00006813
TU141596 other upstream 4800513 23404175 ~ 23407207 (-) True G113050
TU142176 other upstream 7896353 26500015 ~ 26500681 (-) True G113530

Expression Profile