RNA id: AMCG00006794



Basic Information


Item Value
RNA id AMCG00006794
length 213
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00006794
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 20531355 ~ 20535351 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAGACGCCCATCGAGGAGTTTACCCCAACGCCCGCCTTTCCGGCTCTACAGTACCTGGAGTCTGTGGACGTGGAGGGGGTGAATGGAGTGAATGTGGTTAAGGTTGGCCACAAACAGGTGGTCTCTCTCATCCGACAAGGCGGGAATCATCTCCTCATGAAGGTGGTGTCAGTGAGCCGGAAGCCGGAGTCAGAAGAGGTGGTCCGAAAGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU140780 lncRNA upstream 255123 20275993 ~ 20276232 (+) True G112424
TU140733 lncRNA upstream 548059 19983005 ~ 19983296 (+) True G112380
TU140697 lncRNA upstream 590380 19940493 ~ 19940975 (+) True G112350
TU140640 lncRNA upstream 885399 19643651 ~ 19645956 (+) True G112305
TU140636 lncRNA upstream 896131 19633239 ~ 19635224 (+) True G112302
TU140786 lncRNA downstream 2592 20537943 ~ 20538220 (+) True G112430
TU140791 lncRNA downstream 27706 20563057 ~ 20563275 (+) True G112435
TU140792 lncRNA downstream 28147 20563498 ~ 20563788 (+) True G112436
TU140795 lncRNA downstream 30175 20565526 ~ 20571427 (+) True G112438
TU140827 lncRNA downstream 103345 20638696 ~ 20638986 (+) True G112465
AMCG00006792 mRNA upstream 175991 20344401 ~ 20355364 (+) True AMCG00006792
AMCG00006791 mRNA upstream 268556 20262300 ~ 20262799 (+) True AMCG00006791
AMCG00006787 mRNA upstream 484331 20015945 ~ 20047024 (+) True AMCG00006787
AMCG00006786 mRNA upstream 531607 19996524 ~ 19999748 (+) True AMCG00006786
AMCG00006782 mRNA upstream 559957 19966029 ~ 19971398 (+) True AMCG00006782
AMCG00006793 mRNA downstream 9126 20544477 ~ 20562876 (+) True AMCG00006793
AMCG00006797 mRNA downstream 85391 20620742 ~ 20628623 (+) True AMCG00006797
AMCG00006798 mRNA downstream 109878 20645229 ~ 20647241 (+) True AMCG00006798
AMCG00006801 mRNA downstream 131997 20667348 ~ 20674351 (+) True AMCG00006801
AMCG00006804 mRNA downstream 140515 20675866 ~ 20692613 (+) True AMCG00006804
TU139270 other upstream 7487907 13011184 ~ 13043448 (+) True G111197
TU138516 other upstream 10964004 9566213 ~ 9567351 (+) False AMCG00006565
TU138383 other upstream 11807289 8722450 ~ 8724066 (+) True AMCG00006552
TU138304 other upstream 12354569 8175760 ~ 8176786 (+) True G110445
TU138093 other upstream 12876161 7653672 ~ 7655194 (+) True G110279
TU140941 other downstream 402146 20937497 ~ 20938170 (+) False AMCG00006811
TU140974 other downstream 512985 21048336 ~ 21049038 (+) True G112567
TU141018 other downstream 607514 21142865 ~ 21203201 (+) True G112600
TU141703 other downstream 3496762 24032113 ~ 24036112 (+) False AMCG00006878
TU141783 other downstream 3769428 24304779 ~ 24335916 (+) False AMCG00006884

Expression Profile