RNA id: AMCG00006829



Basic Information


Item Value
RNA id AMCG00006829
length 210
RNA type mRNA
GC content 0.40
exon number 3
gene id AMCG00006829
representative False

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 21617632 ~ 21622508 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAGGAAAAGATGTCTCGATTGTATAAAGATGAACAAGATGACTGGGTGACTGTCTGTTTGAAGTACCTTCTCTTTGTATTCAATTTCCTCTTCTGGAGTGTCACACTCCCAGTCAATCCACACAATGTCTTCAAGCTGCACGGTGAATGTGTGAACTGCGCCTTAAAGACAGTATTAGATCTTATTTCACTTATTGACTATGAGATGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141058 lncRNA upstream 312755 21265578 ~ 21304878 (+) True AMCG00006820
TU140980 lncRNA upstream 560660 21056350 ~ 21056973 (+) True G112573
TU140973 lncRNA upstream 585649 21024279 ~ 21031984 (+) True G112566
TU140971 lncRNA upstream 594354 21022933 ~ 21023279 (+) True G112564
TU140937 lncRNA upstream 683415 20930234 ~ 20934218 (+) True G112541
TU141218 lncRNA downstream 429170 22051678 ~ 22058486 (+) True G112754
TU141219 lncRNA downstream 436864 22059372 ~ 22059605 (+) True G112755
TU141220 lncRNA downstream 441196 22063704 ~ 22064035 (+) True G112756
TU141221 lncRNA downstream 443087 22065595 ~ 22065804 (+) True G112757
TU141222 lncRNA downstream 445713 22068221 ~ 22068423 (+) True G112758
AMCG00006824 mRNA upstream 62983 21525700 ~ 21554650 (+) True AMCG00006824
AMCG00006823 mRNA upstream 112258 21499033 ~ 21505375 (+) True AMCG00006823
AMCG00006825 mRNA upstream 232500 21366394 ~ 21385133 (+) True AMCG00006825
AMCG00006822 mRNA upstream 263026 21343642 ~ 21354607 (+) True AMCG00006822
AMCG00006820 mRNA upstream 351826 21265253 ~ 21265807 (+) False AMCG00006820
AMCG00006828 mRNA downstream 169 21622677 ~ 21623130 (+) True AMCG00006828
AMCG00006827 mRNA downstream 46868 21669376 ~ 21682306 (+) True AMCG00006827
AMCG00006833 mRNA downstream 167372 21789880 ~ 21794405 (+) True AMCG00006833
AMCG00006830 mRNA downstream 213367 21835875 ~ 21853017 (+) True AMCG00006830
AMCG00006831 mRNA downstream 233393 21855901 ~ 21868236 (+) True AMCG00006831
TU141018 other upstream 414432 21142865 ~ 21203201 (+) True G112600
TU140974 other upstream 568595 21048336 ~ 21049038 (+) True G112567
TU140941 other upstream 679463 20937497 ~ 20938170 (+) False AMCG00006811
TU139270 other upstream 8574185 13011184 ~ 13043448 (+) True G111197
TU138516 other upstream 12050282 9566213 ~ 9567351 (+) False AMCG00006565
TU141703 other downstream 2409605 24032113 ~ 24036112 (+) False AMCG00006878
TU141783 other downstream 2682271 24304779 ~ 24335916 (+) False AMCG00006884
TU141848 other downstream 2886495 24509003 ~ 24587119 (+) False AMCG00006893
TU141973 other downstream 3995559 25618067 ~ 25618445 (+) True G113369
TU142014 other downstream 4192547 25815055 ~ 25832942 (+) True G113400

Expression Profile