Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006856 |
| length | 927 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | AMCG00006856 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 23149006 ~ 23157435 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K21052 | TMEM5; alpha-dystroglycan beta1,4-xylosyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141482 | lncRNA | upstream | 190401 | 22957248 ~ 22958605 (+) | True | G112955 |
| TU141481 | lncRNA | upstream | 192806 | 22953180 ~ 22956200 (+) | True | G112954 |
| TU141465 | lncRNA | upstream | 267650 | 22877389 ~ 22881356 (+) | True | G112940 |
| TU141460 | lncRNA | upstream | 284498 | 22863985 ~ 22864508 (+) | True | G112938 |
| TU141360 | lncRNA | upstream | 465819 | 22682960 ~ 22683187 (+) | True | G112868 |
| TU141602 | lncRNA | downstream | 351714 | 23509149 ~ 23554741 (+) | False | AMCG00006865 |
| TU141628 | lncRNA | downstream | 423080 | 23580515 ~ 23597219 (+) | True | G113075 |
| TU141629 | lncRNA | downstream | 423080 | 23580515 ~ 23597219 (+) | False | G113075 |
| TU141646 | lncRNA | downstream | 563947 | 23721382 ~ 23721632 (+) | True | G113090 |
| TU141731 | lncRNA | downstream | 919318 | 24076753 ~ 24288917 (+) | False | G113159 |
| AMCG00006852 | mRNA | upstream | 286969 | 22826983 ~ 22862037 (+) | True | AMCG00006852 |
| AMCG00006853 | mRNA | upstream | 331643 | 22809303 ~ 22817363 (+) | True | AMCG00006853 |
| AMCG00006851 | mRNA | upstream | 343400 | 22774720 ~ 22805606 (+) | True | AMCG00006851 |
| AMCG00006850 | mRNA | upstream | 376377 | 22754688 ~ 22772629 (+) | True | AMCG00006850 |
| AMCG00006849 | mRNA | upstream | 434162 | 22689184 ~ 22714844 (+) | True | AMCG00006849 |
| AMCG00006857 | mRNA | downstream | 49758 | 23207193 ~ 23282722 (+) | True | AMCG00006857 |
| AMCG00006861 | mRNA | downstream | 127303 | 23284738 ~ 23289336 (+) | True | AMCG00006861 |
| AMCG00006860 | mRNA | downstream | 146020 | 23303455 ~ 23320773 (+) | True | AMCG00006860 |
| AMCG00006859 | mRNA | downstream | 177651 | 23335086 ~ 23343567 (+) | True | AMCG00006859 |
| AMCG00006858 | mRNA | downstream | 197171 | 23354606 ~ 23369102 (+) | True | AMCG00006858 |
| TU141018 | other | upstream | 1945805 | 21142865 ~ 21203201 (+) | True | G112600 |
| TU140974 | other | upstream | 2099968 | 21048336 ~ 21049038 (+) | True | G112567 |
| TU140941 | other | upstream | 2210836 | 20937497 ~ 20938170 (+) | False | AMCG00006811 |
| TU139270 | other | upstream | 10105558 | 13011184 ~ 13043448 (+) | True | G111197 |
| TU138516 | other | upstream | 13581655 | 9566213 ~ 9567351 (+) | False | AMCG00006565 |
| TU141703 | other | downstream | 874678 | 24032113 ~ 24036112 (+) | False | AMCG00006878 |
| TU141783 | other | downstream | 1147344 | 24304779 ~ 24335916 (+) | False | AMCG00006884 |
| TU141848 | other | downstream | 1351568 | 24509003 ~ 24587119 (+) | False | AMCG00006893 |
| TU141973 | other | downstream | 2460632 | 25618067 ~ 25618445 (+) | True | G113369 |
| TU142014 | other | downstream | 2657620 | 25815055 ~ 25832942 (+) | True | G113400 |
