RNA id: AMCG00006864


Basic Information

Item Value
RNA id AMCG00006864
length 462
RNA type mRNA
GC content 0.50
exon number 4
gene id AMCG00006864
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 23375367 ~ 23376805 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTCATCTCAGAGACTTTACGCATGTACCCTCCTGGATTCAGGTTTGCCCGGGATGCTGCAAGAGATTGCACTGTGAACGGGCAGTTCATTCCCGCTGGTAGTACAGTTGAAATCCCAGCTGGTTATATACATTATGACCCTGAGTTCTGGCCTGACCCAGAGAAGTTCATCCCGGAGAGGTTTACAACAGAGGCAAAAGCCAAAAGGCATCCGTTTGTGTATCTCCCATTTGGAGCCGGACCGCGTAGCTGCGTGGGGATGAGGCTCGCCCTGCTGGAGATCAAGATCGCCATGATTCGCGTTTTCCAAAAGTTCTGCTTCGAAACCTGCCCGGAGACCGAGATCCCAGTGGAGTTAAAATCCAATTCAACCTTAGGACCCAAAAATGGCATCATGGTCAAAATCCTGCAACGCCAGCCAGCAGCCGGGGAAATGACCTCcaatggaaaaaatgtataa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141551 lncRNA downstream 52216 23322933 ~ 23323151 (-) True G113014
TU141550 lncRNA downstream 53596 23321077 ~ 23321771 (-) True G113013
TU141507 lncRNA downstream 220464 23153868 ~ 23154903 (-) True G112979
TU141483 lncRNA downstream 420290 22953185 ~ 22955077 (-) False AMCG00006854
TU141480 lncRNA downstream 433697 22941459 ~ 22941670 (-) True G112953
TU141619 lncRNA upstream 170992 23547797 ~ 23554739 (-) True G113066
TU141622 lncRNA upstream 191350 23568155 ~ 23569274 (-) False AMCG00006866
TU141786 lncRNA upstream 938927 24315732 ~ 24321862 (-) True G113209
TU141789 lncRNA upstream 954282 24331087 ~ 24335914 (-) True G113212
TU141806 lncRNA upstream 996887 24373692 ~ 24375929 (-) True G113225
AMCG00006862 mRNA downstream 73193 23287256 ~ 23302174 (-) True AMCG00006862
AMCG00006854 mRNA downstream 417061 22953176 ~ 22958306 (-) True AMCG00006854
AMCG00006855 mRNA downstream 446962 22881514 ~ 22928405 (-) True AMCG00006855
AMCG00006847 mRNA downstream 723850 22626401 ~ 22651517 (-) True AMCG00006847
AMCG00006846 mRNA downstream 767984 22592099 ~ 22607383 (-) True AMCG00006846
AMCG00006866 mRNA upstream 192079 23568884 ~ 23571133 (-) True AMCG00006866
AMCG00006873 mRNA upstream 254234 23631039 ~ 23752269 (-) True AMCG00006873
AMCG00006876 mRNA upstream 472840 23849645 ~ 23868247 (-) True AMCG00006876
AMCG00006877 mRNA upstream 522354 23899159 ~ 23899569 (-) True AMCG00006877
AMCG00006875 mRNA upstream 543769 23920574 ~ 23925526 (-) True AMCG00006875
TU140946 other downstream 2425531 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 3139161 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 3739442 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 5034157 18339270 ~ 18341210 (-) False AMCG00006754
TU140351 other downstream 5741922 17632891 ~ 17633445 (-) True G112059
TU141596 other upstream 27370 23404175 ~ 23407207 (-) True G113050
TU142176 other upstream 3123210 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 4025795 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 4890457 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 4914650 28291455 ~ 28292598 (-) True G113775

Expression Profile