Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006867 |
| length | 1086 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 1 |
| gene id | AMCG00006867 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 23491010 ~ 23492095 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141482 | lncRNA | upstream | 532405 | 22957248 ~ 22958605 (+) | True | G112955 |
| TU141481 | lncRNA | upstream | 534810 | 22953180 ~ 22956200 (+) | True | G112954 |
| TU141465 | lncRNA | upstream | 609654 | 22877389 ~ 22881356 (+) | True | G112940 |
| TU141460 | lncRNA | upstream | 626502 | 22863985 ~ 22864508 (+) | True | G112938 |
| TU141360 | lncRNA | upstream | 807823 | 22682960 ~ 22683187 (+) | True | G112868 |
| TU141602 | lncRNA | downstream | 17054 | 23509149 ~ 23554741 (+) | False | AMCG00006865 |
| TU141628 | lncRNA | downstream | 88420 | 23580515 ~ 23597219 (+) | True | G113075 |
| TU141629 | lncRNA | downstream | 88420 | 23580515 ~ 23597219 (+) | False | G113075 |
| TU141646 | lncRNA | downstream | 229287 | 23721382 ~ 23721632 (+) | True | G113090 |
| TU141731 | lncRNA | downstream | 584658 | 24076753 ~ 24288917 (+) | False | G113159 |
| AMCG00006863 | mRNA | upstream | 88135 | 23396869 ~ 23402875 (+) | True | AMCG00006863 |
| AMCG00006858 | mRNA | upstream | 121908 | 23354606 ~ 23369102 (+) | True | AMCG00006858 |
| AMCG00006859 | mRNA | upstream | 147443 | 23335086 ~ 23343567 (+) | True | AMCG00006859 |
| AMCG00006860 | mRNA | upstream | 170237 | 23303455 ~ 23320773 (+) | True | AMCG00006860 |
| AMCG00006861 | mRNA | upstream | 201674 | 23284738 ~ 23289336 (+) | True | AMCG00006861 |
| AMCG00006865 | mRNA | downstream | 32747 | 23524842 ~ 23553299 (+) | True | AMCG00006865 |
| AMCG00006872 | mRNA | downstream | 82212 | 23574307 ~ 23580774 (+) | True | AMCG00006872 |
| AMCG00006870 | mRNA | downstream | 88800 | 23580895 ~ 23594391 (+) | True | AMCG00006870 |
| AMCG00006871 | mRNA | downstream | 104001 | 23596096 ~ 23596653 (+) | True | AMCG00006871 |
| AMCG00006868 | mRNA | downstream | 120905 | 23613000 ~ 23619393 (+) | True | AMCG00006868 |
| TU141018 | other | upstream | 2287809 | 21142865 ~ 21203201 (+) | True | G112600 |
| TU140974 | other | upstream | 2441972 | 21048336 ~ 21049038 (+) | True | G112567 |
| TU140941 | other | upstream | 2552840 | 20937497 ~ 20938170 (+) | False | AMCG00006811 |
| TU139270 | other | upstream | 10447562 | 13011184 ~ 13043448 (+) | True | G111197 |
| TU138516 | other | upstream | 13923659 | 9566213 ~ 9567351 (+) | False | AMCG00006565 |
| TU141703 | other | downstream | 540018 | 24032113 ~ 24036112 (+) | False | AMCG00006878 |
| TU141783 | other | downstream | 812684 | 24304779 ~ 24335916 (+) | False | AMCG00006884 |
| TU141848 | other | downstream | 1016908 | 24509003 ~ 24587119 (+) | False | AMCG00006893 |
| TU141973 | other | downstream | 2125972 | 25618067 ~ 25618445 (+) | True | G113369 |
| TU142014 | other | downstream | 2322960 | 25815055 ~ 25832942 (+) | True | G113400 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00027067 | True | 74197 | lncRNA | 0.36 | 1 | NC_007129.7 | 12580449 ~ 12654645 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01000013_08336335_08399543.mRNA | True | 1940 | mRNA | 0.56 | 7 | CI01000013 | 8336335 ~ 8399621 (+) |
