RNA id: AMCG00006887


Basic Information

Item Value
RNA id AMCG00006887
length 831
RNA type mRNA
GC content 0.53
exon number 4
gene id AMCG00006887
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 24353437 ~ 24357780 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCGTCCCAGGTCACAGTCTCAGCTGCCCAGCGGACACAGACCCTGTCGAGCTCATGTGGGATATCCTTGACCGCTCCACGTCTCACTGTCCCGGTGTTAGGATTGCGCAGTCCTTCCCCAACCCATCTCCGCTGCTCAGCTCCAACTGGGGGAACCCAAAGAGATATGTGCACCTACAGACTTCTTCAGAAAGCAGGACTTTTTACTTGGAGGTCGGATCGGATGGGCAAGTGAGCAAAACCCCCTCCAGGAGCGCATACAGTGTATTGTTACTGAAGACGGAGACGAGAGATCGGCTGGCCATCATGGGTGTTAAAAGCAAACGTTATCTGTGCATGGACGAGGAAGGACATACTTTCACTTCTACCGTCTGCCATAAAGAGGACTGCTTGTTCCACCACAAGCTTTTGGAAAACCACAGAGACGTATACTATTCGTGCAAGAATGATCTGGTCCTCAACCTCGATGGAGTCAAGCACACCTATGTGACTGGGAAGAACCTGCCAGCCTATTCCCTGTTCTTGTCTGAACCGAACACAGTGCCGCTGGAGCAGCTGCTGCACAGGGAGAAGAGATACGGCCACGTCAATCCGTCAGACCCCTTGGGAATTTTCCTTTCCCACAACTGGCAGTATGACGAGACCTCAGACTCGAGGGCTGCAAACACTGATCTGTATGCTGCCCTCTCTGCCCAAGCACATGCAGTATCCAGGGAGAGTCACGGTACAACATATAATGAAAAGGTGGACCCTGTCGATCCCCTGAACCTCCTAGAACCTCAAGACAGCATGAGCCCCCGATTTGCGCAACAGCAGGGACAGAGTTAG

Function

GO:

id name namespace
GO:0030500 regulation of bone mineralization biological_process
GO:0030643 cellular phosphate ion homeostasis biological_process

KEGG:

id description
K22428 FGF23; fibroblast growth factor 23

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141789 lncRNA downstream 17523 24331087 ~ 24335914 (-) True G113212
TU141786 lncRNA downstream 31575 24315732 ~ 24321862 (-) True G113209
TU141622 lncRNA downstream 784163 23568155 ~ 23569274 (-) False AMCG00006866
TU141619 lncRNA downstream 798698 23547797 ~ 23554739 (-) True G113066
TU141551 lncRNA downstream 1030286 23322933 ~ 23323151 (-) True G113014
TU141806 lncRNA upstream 15912 24373692 ~ 24375929 (-) True G113225
TU141891 lncRNA upstream 314008 24671788 ~ 24673498 (-) True G113301
TU141978 lncRNA upstream 1034016 25391796 ~ 25392318 (-) True G113374
TU141979 lncRNA upstream 1037756 25395536 ~ 25398698 (-) True G113375
TU141993 lncRNA upstream 1358745 25716525 ~ 25716987 (-) True G113389
AMCG00006883 mRNA downstream 295612 24041077 ~ 24057825 (-) True AMCG00006883
AMCG00006882 mRNA downstream 322235 24025708 ~ 24031202 (-) True AMCG00006882
AMCG00006881 mRNA downstream 359083 23972116 ~ 23994354 (-) True AMCG00006881
AMCG00006880 mRNA downstream 383233 23932400 ~ 23970204 (-) True AMCG00006880
AMCG00006875 mRNA downstream 427911 23920574 ~ 23925526 (-) True AMCG00006875
AMCG00006886 mRNA upstream 1401 24359181 ~ 24367936 (-) True AMCG00006886
AMCG00006889 mRNA upstream 20019 24377799 ~ 24388627 (-) True AMCG00006889
AMCG00006891 mRNA upstream 30850 24388630 ~ 24407218 (-) True AMCG00006891
AMCG00006890 mRNA upstream 63322 24421102 ~ 24439498 (-) True AMCG00006890
AMCG00006895 mRNA upstream 326228 24684008 ~ 24715289 (-) True AMCG00006895
TU141596 other downstream 946230 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 3403601 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 4117231 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 4717512 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 6012227 18339270 ~ 18341210 (-) False AMCG00006754
TU142176 other upstream 2142235 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 3044820 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 3909482 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 3933675 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 4353439 28711219 ~ 28812548 (-) True G113833

Expression Profile