RNA id: AMCG00006892


Basic Information

Item Value
RNA id AMCG00006892
length 1701
RNA type mRNA
GC content 0.52
exon number 13
gene id AMCG00006892
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 24480018 ~ 24502346 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTTCCCGAAATAAACAAGtCATCTCGGCCAGATGCCTTCACTCACAGATTGCAACAGGCTGACACCAACCGACAGGGCTCCAACAAGCCCTACCAACAGAAATTTGGATCCAATGTTGGCACCCTGCCCCAGCTGGAGGCCCCAATCAAGCAAATGGTGGTAACCAATGCCAAGCTGCACCACCAGCATGAGAGCATTCTCCCACACATTGCCAACAAGGGCATGCCCAATGGTTATCAGGCCCACCAGGAGGAGAGGCACAGGGGCTTGCAGTACCCGACGCGATTCAGCTCCGTGGAGAGTCTCGCCGACTCCACCAGCAAGAGCCATTCCAACAagcaggagaaggagaggaCATTCGAAGGGCACAGGCTTCCCATTGCGCCGGCAGAGGCTCTAAAGCACTTCCAGAACCGGCTGTCAGAGTTCGAGCAGGAGGAGATCATGGACTACTCTGAGCTGTGGTACCTTGGCCTGGACTCCAAGAAGATAGAGGGGGACCAAGGGAGCCAGCAGAACTGCGGCTATGACGATGAACACGGCAGCTACATAAAGGTCCTGCATGATCACATTGCTTATCGCTTTGAAGTGCTGGAAGTAATTGGAAAAGGATCCTTTGGACAAGTCCTTAAATGTCTGGATCATAAAACCAACGAGCTTGTTGCTATCAAAATAATTCGCAACAAAAAGagatttcacCATCAAGCCCTGGTGGAGCTGAAAATCCTTGATGCCCTGCGCAGGAAAGACAAAGAGAACAGCCACAATGTCATCCACATGAAGGAGTACTTCTACTTTCGCAACCACCTCTGCATTTCCTTTGAGCTTTTAGGATTAAACCTGTACGAGctcattaagaaaaacaactttcaaGGATTCAGACAAGGAAATATAAAAGTGGTTGACTTTGGATCCAGTTGCTATGAACAACAGAGAGTGTACACCTACATACAGAGCCGGTTCTATCGCTCCCCAGAGGTGATTCTGGGGCACCCGTATAGCATGGCCATTGACATGTGGAGTCTGGGCTGCATTCTGGCAGAGCTGTACACCGGCTACCCTCTGTTCCCCGGGGAGAACGAGGTGGAGCAGATTGCGTGTATCATGGAGGTCTTGGGGCTGCCTCCAAATGAATTTGTTCACACAGCATCACGAAGGCGATTATTTTTTGATTCGAAAGGGAACCCTAGAAACATTACGAACAGTAAGGGCCGGAAAAGAAGACCCAGCTCCAAAGAGCTCACCACTATGCTGAAGACGAATGACCCTCTGtttctggatttcttaagaGGCTGCCTAATGTGGGACCCTCAGAAGCGCATGACCCCAGATGAGGCCATGCAGCACGACTGGATCCAGGAAGGCCGCTCACACAAGACCAGGCCCAAAACACGCCCTGTGAGGAGGCCTACTGAGAGCATTCTGGTCCCGGACAACAACAAGGAACACAGCCACCGCAAGGCCCCCAGCAACAGGACAGGTTCTGGAAAGTTAGAGAAGATGTCTACAGTCGAGAGACTCAGGCCCATTGGGGCGTCTGCGGAGGAGGAGATGCACGAGGACACCGCCCAGGACACTGCggggagaagggagacaggGGAGCGTCCAGTGCACATAATCATCAAACCCCAGCCTGCAGaccaccacacagacacagactctcAGGACCAGACACAGACCTTGCCCCCTATTGTATAA

Function

GO: NA

KEGG:

id description
K18669 DYRK2_3_4; dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141814 lncRNA upstream 69714 24410057 ~ 24410304 (+) True G113233
TU141805 lncRNA upstream 107183 24370718 ~ 24372835 (+) True G113224
TU141731 lncRNA upstream 191101 24076753 ~ 24288917 (+) False G113159
TU141872 lncRNA downstream 171279 24673625 ~ 24676576 (+) True G113283
TU141921 lncRNA downstream 740219 25242565 ~ 25260402 (+) True G113319
TU141961 lncRNA downstream 889509 25391855 ~ 25395392 (+) True G113357
TU141962 lncRNA downstream 918312 25420658 ~ 25420875 (+) True G113358
TU141976 lncRNA downstream 1186389 25688735 ~ 25689111 (+) True G113372
AMCG00006888 mRNA upstream 32455 24440431 ~ 24447563 (+) True AMCG00006888
AMCG00006885 mRNA upstream 132655 24337908 ~ 24347363 (+) True AMCG00006885
AMCG00006884 mRNA upstream 144138 24304696 ~ 24335880 (+) True AMCG00006884
AMCG00006878 mRNA upstream 443913 24032089 ~ 24036105 (+) True AMCG00006878
AMCG00006879 mRNA upstream 457375 24018072 ~ 24022643 (+) True AMCG00006879
AMCG00006893 mRNA downstream 7702 24510048 ~ 24520705 (+) True AMCG00006893
AMCG00006894 mRNA downstream 148314 24650660 ~ 24653870 (+) True AMCG00006894
AMCG00006898 mRNA downstream 518784 25021130 ~ 25036473 (+) True AMCG00006898
AMCG00006899 mRNA downstream 538246 25040592 ~ 25041958 (+) True AMCG00006899
AMCG00006901 mRNA downstream 576041 25078387 ~ 25114339 (+) True AMCG00006901
TU141783 other upstream 144102 24304779 ~ 24335916 (+) False AMCG00006884
TU141703 other upstream 443906 24032113 ~ 24036112 (+) False AMCG00006878
TU141018 other upstream 3276817 21142865 ~ 21203201 (+) True G112600
TU140974 other upstream 3430980 21048336 ~ 21049038 (+) True G112567
TU140941 other upstream 3541848 20937497 ~ 20938170 (+) False AMCG00006811
TU141848 other downstream 6657 24509003 ~ 24587119 (+) False AMCG00006893
TU141973 other downstream 1115721 25618067 ~ 25618445 (+) True G113369
TU142014 other downstream 1312709 25815055 ~ 25832942 (+) True G113400

Expression Profile