RNA id: AMCG00006903



Basic Information


Item Value
RNA id AMCG00006903
length 734
RNA type mRNA
GC content 0.50
exon number 9
gene id AMCG00006903
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25156086 ~ 25214360 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGTGCCTGACTGGCTGATTGACCGACTAATGAGAGCTGGATtctcaatcagtcagtcagccaaTCAGACACCTGGGGTGGTGGTGATGGGAGACGGGGGCCATTCAGcCATTGGGGTGCAACTCAGACTGGATCTGTTGGAGAGAATATTCTGGACAGCAACTAGACAGTGCAACACAATAGATGGCATGTGTCCAATCAATTGTGACAACGACAACCTGAACTGCTATCTAATAGATAACAATGGCTTCATTCTGGTCTCCAAAGAGAAGAAAGAGTCTGGGAAGTTCTTTGGGGAGGTGGATGGCTCTGTGATGCTGCAGCTTCTGAACATGGGCATGTTCAAAAAgGTGTCCCTGTTCGATTACCAGGCCATGTGTAAAATCTCTGGCCATCACCACAATGGCGCACGGCCTCTTCTCActcatAAACAAAAGAGACACGAAATGCTGCAGCCCTGTGACACTGAATACCCAGGCTTCGTGTACGAGCCCTCCATCAAAGAGACCAACGGCTTCATCGAGTGTGGGAGCTGCCAGAATAACCTGCTAATGCTGGTCTCTCAAGCCGACTGTGACTGTAGTATCTACCCTCCTATGACACTCGAGCCAAAGGAATGTTCACAAACTTTATTGTTCCTTAATTCCTCCGAACATAACGCCTCAGTCAAGTGTGACAGGATGCGCTCGCAAAAGGTCCGGAGGCGTCCTGATTCCTGCCATGCGTTCCACCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141872 lncRNA upstream 479510 24673625 ~ 24676576 (+) True G113283
TU141814 lncRNA upstream 745782 24410057 ~ 24410304 (+) True G113233
TU141805 lncRNA upstream 783251 24370718 ~ 24372835 (+) True G113224
TU141732 lncRNA upstream 867169 24076753 ~ 24288917 (+) True G113159
TU141921 lncRNA downstream 28205 25242565 ~ 25260402 (+) True G113319
TU141961 lncRNA downstream 177495 25391855 ~ 25395392 (+) True G113357
TU141962 lncRNA downstream 206298 25420658 ~ 25420875 (+) True G113358
TU141976 lncRNA downstream 474375 25688735 ~ 25689111 (+) True G113372
TU141977 lncRNA downstream 482837 25697197 ~ 25697408 (+) True G113373
AMCG00006901 mRNA upstream 41747 25078387 ~ 25114339 (+) True AMCG00006901
AMCG00006899 mRNA upstream 114128 25040592 ~ 25041958 (+) True AMCG00006899
AMCG00006898 mRNA upstream 119613 25021130 ~ 25036473 (+) True AMCG00006898
AMCG00006894 mRNA upstream 502216 24650660 ~ 24653870 (+) True AMCG00006894
AMCG00006893 mRNA upstream 635381 24510048 ~ 24520705 (+) True AMCG00006893
AMCG00006905 mRNA downstream 121985 25336345 ~ 25340058 (+) True AMCG00006905
AMCG00006910 mRNA downstream 501467 25715827 ~ 25721613 (+) True AMCG00006910
AMCG00006916 mRNA downstream 596203 25810563 ~ 25822470 (+) True AMCG00006916
AMCG00006912 mRNA downstream 615114 25829474 ~ 25836610 (+) True AMCG00006912
AMCG00006911 mRNA downstream 637045 25851405 ~ 25861865 (+) True AMCG00006911
TU141848 other upstream 568967 24509003 ~ 24587119 (+) False AMCG00006893
TU141783 other upstream 820170 24304779 ~ 24335916 (+) False AMCG00006884
TU141703 other upstream 1119974 24032113 ~ 24036112 (+) False AMCG00006878
TU141018 other upstream 3952885 21142865 ~ 21203201 (+) True G112600
TU140974 other upstream 4107048 21048336 ~ 21049038 (+) True G112567
TU141973 other downstream 403707 25618067 ~ 25618445 (+) True G113369
TU142014 other downstream 600695 25815055 ~ 25832942 (+) True G113400

Expression Profile