RNA id: AMCG00006913


Basic Information

Item Value
RNA id AMCG00006913
length 1751
RNA type mRNA
GC content 0.50
exon number 10
gene id AMCG00006913
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25725239 ~ 25735881 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AACTGGTTCAAACGAGACAACGTTATATTTGAAGCAATGaaacagtcCAGGCAAGGCACAATGGACACCCAGCCCTGGCCTGGATACCTGCAGGTCTTCGCGCTGGCACTTTGCCTGATGTGCGTGTGTCACGGTTCTCCAGACCCCCGTCTGAGAGCCAGTCTTCTCCAGCAGGAGGCCTTCCAGCGGACAGGGGGGAATGTATTGCTGACAGATATGGAGCTGCAGGTCAGTGCGCAGCTCCAGAAACTGAAGGAGCAGGAGGTGGCCGCCTCTAGGATCTCCGGGATGTTCCCCCCTGCCATGCACTTCTTCAAGGTGCGGGAGCTCATTGAGAAGAGTGATGTTTTCAAGTTCTTGCAGAAAATGCCCAAAGGGGCTGCACTGCACATTCACGACTACGCAATAGTGAAAGCGGACTGGCTGATCAGGAATGCCAGCTATCTTCCCAACTGCTACATCTGCTTCACCCCTGAGCAGTCAGTTCGATTTCACTACTTCGGTAAACATTCTCTTTCTAAGTTGTCTGAGTGCTCTGAATGGATGCTATTGGAATCTCTGAGGAAAACTATTGCCAGTGTCACCGATTTTGATAACAGTTTAATCCGCAACTGTACCCTATTCACAGAGGACCCTGTGGCAGCCTTCCCCACCCAGGATGCATTGTGGCGGAGGTTTGAGCAGATGTTTATAGTGGTCTCAGGACTCATTTCTTTTGCCCCCGTCTTTAAAGAGTACTTCTACCAGGGCCTGCTGGAGTTCTACCAGGACAACGTCATGTATGTGGAACTCCGTGCAATGCTGCCACCGACCTATGAGTTGGACGGAACAACTCATGACAAGTTCTGGGCCATGAAGGCCTACGAGGAAGTTGGTAGGCGGTTTGTAGCCGATCACCCTGACTTCATGGGAGTGCGAGTGATTGTCACAGTACACAGgCACATGGATGCGTCTGATGTCAAAAAGGCGGTTCTAGAAGCCatgaaactgaaaaccacaTTCCCTGACACAGTGGCAGGCTTTGATTTGGTGGGGTATGAAGATGGTGGTCAACCACTATGGTACTTCAGGGAGGCACTGTCTCTGCCCAGTGAGCAAGGATTCATCCTTCCCTACTTCTTTCATGCAGGAGAGACTGACTGGGATGGCACTGATGTGGATCAGAATGTGCTTGATGCCCTCTTGTTTAACACCAGCCGTATTGGGCATGGCTTTGCTCTTGCCCACCACCCAGTCGCCAAAgagctctccaggaacaggagTGTGCCAATCGAGCTCTGCCCCATCTCAAACCAGGTGCTGATGCTGGTGTCTGACCTGAGGAATCACCCGGCTGCTGTGCTGATGGCAGAAGGCCACCCCATGGTGGTCAGCTCAGACGACCCAGCTGTCTTCGGGGCCACAGGGCTGTCATACGATTTCTACGAGGTCTTTATGGGTATCGGAGGATTGAAGTCTCATCTAGGGACTCTTAAGGAGCTTGCCATGAATTCCATCAAGTACAGTTCCTTGTCAcatgaactgaaaataaaagtggaaaCCATGTGGCAGATGAAATGGAAAACGTTCATTGCTGAGACTTGGACACATCACTTCAGAGACCTATAGGAGCTCAATACTCTTGCACTGATTGAACAGCCACCTAATGTGCTATAATCCACATGCTGACTACTTTTTAAAAGCCTGTCCAGGAAGACACAtcattcagttttcttttttttttttttttgatgcattaaagctgttttttt

Function

GO: NA

KEGG:

id description
K19572 CECR1, ADA2; adenosine deaminase CECR1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141995 lncRNA downstream 5664 25719362 ~ 25719575 (-) True G113391
TU141994 lncRNA downstream 6447 25718417 ~ 25718792 (-) True G113390
TU141993 lncRNA downstream 8252 25716525 ~ 25716987 (-) True G113389
TU141979 lncRNA downstream 326541 25395536 ~ 25398698 (-) True G113375
TU141978 lncRNA downstream 332921 25391796 ~ 25392318 (-) True G113374
TU141998 lncRNA upstream 2673 25738554 ~ 25738867 (-) True G113393
TU142000 lncRNA upstream 5187 25741068 ~ 25745985 (-) True G113395
TU142003 lncRNA upstream 5187 25741068 ~ 25745490 (-) False G113395
TU142052 lncRNA upstream 130504 25866385 ~ 25867279 (-) True G113431
TU142099 lncRNA upstream 259760 25995641 ~ 25995929 (-) True G113468
AMCG00006909 mRNA downstream 53496 25545313 ~ 25671743 (-) True AMCG00006909
AMCG00006908 mRNA downstream 206916 25516575 ~ 25518323 (-) True AMCG00006908
AMCG00006907 mRNA downstream 276827 25400710 ~ 25448412 (-) True AMCG00006907
AMCG00006906 mRNA downstream 411798 25309625 ~ 25313441 (-) True AMCG00006906
AMCG00006904 mRNA downstream 466672 25242554 ~ 25258567 (-) True AMCG00006904
AMCG00006914 mRNA upstream 11255 25747136 ~ 25778618 (-) True AMCG00006914
AMCG00006915 mRNA upstream 102874 25838755 ~ 25847485 (-) True AMCG00006915
AMCG00006920 mRNA upstream 152376 25888257 ~ 25893080 (-) True AMCG00006920
AMCG00006919 mRNA upstream 163670 25899551 ~ 25911582 (-) True AMCG00006919
AMCG00006918 mRNA upstream 201826 25937707 ~ 25949127 (-) True AMCG00006918
TU141596 other downstream 2318032 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 4775403 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 5489033 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 6089314 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 7384029 18339270 ~ 18341210 (-) False AMCG00006754
TU142176 other upstream 764134 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 1666719 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 2531381 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 2555574 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 2975338 28711219 ~ 28812548 (-) True G113833

Expression Profile