RNA id: AMCG00006925



Basic Information


Item Value
RNA id AMCG00006925
length 273
RNA type mRNA
GC content 0.54
exon number 2
gene id AMCG00006925
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 26134171 ~ 26140819 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTGCATGGGGGGCCCTCCTGCCCTCCTGTCCTTATGCCCCAAGGCCTTTGGACAGGCTTACTCAGCCCAGCGAAAGGTTGCTGAAGATGGAGAGACTCAtgaggaaaacctgctccagGAGTCTGCCTCCAAAGAGGCCTACTACATGGCCAAGATCCTGGAGCTCCAGACAGAGCTGAAGCAGAACAAGTCTGTCGCCTCCAATGTACAGGCGGAAAATGAAAGGCTCAACGCTGTGGTGCAGGACCTTAGAGAGGTAACCAAGAGATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142110 lncRNA downstream 95848 26001446 ~ 26038323 (-) True G113479
TU142114 lncRNA downstream 123672 26001446 ~ 26010499 (-) False G113479
TU142099 lncRNA downstream 138242 25995641 ~ 25995929 (-) True G113468
TU142052 lncRNA downstream 266892 25866385 ~ 25867279 (-) True G113431
TU142000 lncRNA downstream 388186 25741068 ~ 25745985 (-) True G113395
TU142233 lncRNA upstream 918550 27059369 ~ 27059594 (-) True G113573
TU142246 lncRNA upstream 1014716 27155535 ~ 27155857 (-) True G113586
TU142247 lncRNA upstream 1024360 27165179 ~ 27165398 (-) True G113587
TU142308 lncRNA upstream 1129640 27270459 ~ 27363030 (-) True G113631
TU142352 lncRNA upstream 1659119 27799938 ~ 27800294 (-) True G113667
AMCG00006923 mRNA downstream 28785 26092897 ~ 26105386 (-) True AMCG00006923
AMCG00006922 mRNA downstream 141066 25976490 ~ 25993105 (-) True AMCG00006922
AMCG00006918 mRNA downstream 185044 25937707 ~ 25949127 (-) True AMCG00006918
AMCG00006919 mRNA downstream 222589 25899551 ~ 25911582 (-) True AMCG00006919
AMCG00006920 mRNA downstream 241091 25888257 ~ 25893080 (-) True AMCG00006920
AMCG00006924 mRNA upstream 43432 26184251 ~ 26185762 (-) True AMCG00006924
AMCG00006926 mRNA upstream 51570 26192389 ~ 26361451 (-) True AMCG00006926
AMCG00006929 mRNA upstream 467724 26608543 ~ 26639948 (-) True AMCG00006929
AMCG00006932 mRNA upstream 1168073 27308892 ~ 27309170 (-) True AMCG00006932
AMCG00006935 mRNA upstream 1496401 27637220 ~ 27649919 (-) True AMCG00006935
TU141596 other downstream 2726964 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 5184335 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 5897965 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 6498246 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 7792961 18339270 ~ 18341210 (-) False AMCG00006754
TU142176 other upstream 359196 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 1261781 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 2126443 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 2150636 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 2570400 28711219 ~ 28812548 (-) True G113833

Expression Profile