RNA id: AMCG00006934



Basic Information


Item Value
RNA id AMCG00006934
length 372
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00006934
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27668786 ~ 27677200 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGGGCTCTACTGGAGCAAAAGCAGAGGAGGAAGCGGCAGGAACCTCTGATGGTGCAGCCCAACCCCGAAGCCAAGCCCCGGCGCTCTAAACCTCGCCGTAGTGAAGAGCAGGCCCCACTGGTGGAGTCTCGCCTTAGCATCACCAGTGACGTTATTCTTGATGGTATTGATGGTCCTGCAGCATTTATGAGCCCTGAGATTCCTGACTTGGGCCCCAAGACCCAGATCCTGTCAGTGAGCCAGTCTCCCCCAGCAGAGGAAGTAGACAGAGATGGTGATACTGAGACCTTGCTAGAACCCTCAACCAAAACTGACATCCAGGACATCCTACAGAAACGAGGTGAGCATCCCCAGGCCAACATCACACAATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142308 lncRNA downstream 305756 27270459 ~ 27363030 (-) True G113631
TU142247 lncRNA downstream 503388 27165179 ~ 27165398 (-) True G113587
TU142246 lncRNA downstream 512929 27155535 ~ 27155857 (-) True G113586
TU142233 lncRNA downstream 609192 27059369 ~ 27059594 (-) True G113573
TU142114 lncRNA downstream 1658287 26001446 ~ 26010499 (-) False G113479
TU142352 lncRNA upstream 122738 27799938 ~ 27800294 (-) True G113667
TU142359 lncRNA upstream 125290 27802490 ~ 27805153 (-) True G113673
TU142368 lncRNA upstream 178911 27856111 ~ 27856461 (-) True G113681
TU142417 lncRNA upstream 381161 28058361 ~ 28058567 (-) True G113722
TU142418 lncRNA upstream 381519 28058719 ~ 28058931 (-) True G113723
AMCG00006935 mRNA downstream 18867 27637220 ~ 27649919 (-) True AMCG00006935
AMCG00006932 mRNA downstream 359616 27308892 ~ 27309170 (-) True AMCG00006932
AMCG00006929 mRNA downstream 1028838 26608543 ~ 26639948 (-) True AMCG00006929
AMCG00006926 mRNA downstream 1307335 26192389 ~ 26361451 (-) True AMCG00006926
AMCG00006924 mRNA downstream 1483024 26184251 ~ 26185762 (-) True AMCG00006924
AMCG00006938 mRNA upstream 128283 27805483 ~ 27824074 (-) True AMCG00006938
AMCG00006939 mRNA upstream 287767 27964967 ~ 27970379 (-) True AMCG00006939
AMCG00006941 mRNA upstream 325302 28002502 ~ 28015328 (-) True AMCG00006941
AMCG00006940 mRNA upstream 339463 28016663 ~ 28047076 (-) True AMCG00006940
AMCG00006948 mRNA upstream 464057 28141257 ~ 28144216 (-) True AMCG00006948
TU142323 other downstream 141438 27402600 ~ 27527348 (-) True G113645
TU142176 other downstream 1168105 26500015 ~ 26500681 (-) True G113530
TU141596 other downstream 4261579 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 6718950 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 7432580 20235856 ~ 20236206 (-) True G112420
TU142485 other upstream 590062 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 614255 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 1034019 28711219 ~ 28812548 (-) True G113833

Expression Profile