RNA id: AMCG00006952



Basic Information


Item Value
RNA id AMCG00006952
length 312
RNA type mRNA
GC content 0.41
exon number 2
gene id AMCG00006952
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 28546321 ~ 28550460 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTTGGTGTGACTTTCTCGGCAGTGTTTGGTGTGATAATCTACAGAATAACCACCTCAGCTGTTATGGCAATGAGCCCAGATCCGCACACAAAATCTAATGTTCGTGTCACTGTGACTTCTACTGCAGTTATCATCAACCTTGTTGTCATCCTCATTCTGGATGAGATCTATGGTGCTGTAGCCACCTGGCTGACAGAAATTGAGATTCCTAAAACAGAGAAAGATTTTGAAGAGCGTCTTATAATAAAGGCATTCCTCCTGAAGTTTATGAACTCCTACGCCCCTATTTTCTATGTTGCTTTTTTCAAAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142465 lncRNA upstream 330086 28216000 ~ 28216235 (+) True G113760
TU142447 lncRNA upstream 342213 28200542 ~ 28204108 (+) True G113747
TU142443 lncRNA upstream 404070 28141283 ~ 28142251 (+) True G113743
TU142441 lncRNA upstream 407383 28138351 ~ 28138938 (+) True G113741
TU142407 lncRNA upstream 467862 28077953 ~ 28078459 (+) True G113717
TU142521 lncRNA downstream 68546 28619006 ~ 28619812 (+) True G113805
TU142540 lncRNA downstream 96805 28647265 ~ 28647523 (+) True G113824
TU142552 lncRNA downstream 279199 28829659 ~ 28830065 (+) True G113836
TU142564 lncRNA downstream 318266 28868726 ~ 28868988 (+) True G113846
TU142565 lncRNA downstream 318599 28869059 ~ 28869326 (+) True G113847
AMCG00006951 mRNA upstream 52310 28493435 ~ 28494011 (+) True AMCG00006951
AMCG00006946 mRNA upstream 145250 28368124 ~ 28401071 (+) True AMCG00006946
AMCG00006945 mRNA upstream 181711 28332468 ~ 28364610 (+) True AMCG00006945
AMCG00006947 mRNA upstream 214967 28293020 ~ 28331354 (+) True AMCG00006947
AMCG00006944 mRNA upstream 357494 28147838 ~ 28188827 (+) True AMCG00006944
AMCG00006953 mRNA downstream 75678 28626138 ~ 28626413 (+) True AMCG00006953
AMCG00006954 mRNA downstream 299323 28849783 ~ 28855154 (+) True AMCG00006954
AMCG00006961 mRNA downstream 567117 29117577 ~ 29121806 (+) True AMCG00006961
AMCG00006963 mRNA downstream 624442 29174902 ~ 29177235 (+) True AMCG00006963
AMCG00006962 mRNA downstream 659733 29210193 ~ 29214986 (+) True AMCG00006962
TU142014 other upstream 2713379 25815055 ~ 25832942 (+) True G113400
TU141973 other upstream 2927876 25618067 ~ 25618445 (+) True G113369
TU141848 other upstream 3959202 24509003 ~ 24587119 (+) False AMCG00006893
TU141783 other upstream 4210405 24304779 ~ 24335916 (+) False AMCG00006884
TU141703 other upstream 4510209 24032113 ~ 24036112 (+) False AMCG00006878

Expression Profile