RNA id: AMCG00006960



Basic Information


Item Value
RNA id AMCG00006960
length 618
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00006960
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 29027412 ~ 29032897 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATAAGGATAGCAAGACCACGGCCGAGCATCGCTTCTTTCGCAGGAGCGTCATCTGCGACTCCAACGCTACGGCCCTAGACCTTCCCAGCAAAGCATGCTTCCTGTCCTCCCCTCCGGATTCGGACTCATCCCTGTCTATCATCATTGTGGAACCCAGTGATGCCCCCTGTGTGGTTGCCCAGCCGGTGCCCATAACGGTGACAGAGACGGATGCTGATATCTGCCTGAAAGATGGAGGACACGCTCCAGAACAGAGCCCTGAGCTCCTGGAGATCTGCGATGGGGAACAAGAGAAGTCCACTCAAGCAGCAGCCACGGACGCCAGTAGTCAAGTTGGGGAGCCCGATGGGGGTAGTGTTATAGAAAAGGAATTGGAAGGGAAGGAGGCTGCCAAGGCAAGGGCAGACCAGAAGATGGAAGCTGAGCTACGGAAAATTCAGGAAGACAACGAGGAGGTGGAGACAAAAGCAGTGGGAACCTCGCCGGATGGCCGTTTCCTCAAGTTTGACATCGAGATCGGACGGGGATCCTTCAAAACTGTCTACAAGGGCCTGGATACAGAAACAACTGTGGAGGTGGCTTGGTGTGAGTTGCAGCAGGAACTAGAAAGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142594 lncRNA downstream 159592 28863879 ~ 28867820 (-) True G113876
TU142539 lncRNA downstream 385975 28641129 ~ 28641437 (-) True G113823
TU142514 lncRNA downstream 619573 28407406 ~ 28407839 (-) True G113799
TU142419 lncRNA downstream 951121 28059128 ~ 28076291 (-) False G113724
TU142623 lncRNA upstream 39284 29072181 ~ 29074799 (-) True G113905
AMCG00006959 mRNA downstream 60888 28931030 ~ 28966524 (-) True AMCG00006959
AMCG00006958 mRNA downstream 121201 28902341 ~ 28906211 (-) True AMCG00006958
AMCG00006956 mRNA downstream 134919 28880317 ~ 28892493 (-) True AMCG00006956
AMCG00006957 mRNA downstream 158486 28867902 ~ 28868926 (-) True AMCG00006957
AMCG00006955 mRNA downstream 215933 28750262 ~ 28811479 (-) True AMCG00006955
AMCG00006967 mRNA upstream 135666 29168563 ~ 29257106 (-) True AMCG00006967
TU142549 other downstream 214864 28711219 ~ 28812548 (-) True G113833
TU142485 other downstream 734814 28267262 ~ 28292598 (-) False G113775
TU142484 other downstream 734814 28291455 ~ 28292598 (-) True G113775
TU142323 other downstream 1500064 27402600 ~ 27527348 (-) True G113645
TU142176 other downstream 2526731 26500015 ~ 26500681 (-) True G113530

Expression Profile