Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU135742 |
| length | 524 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G108513 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 1067036 ~ 1067725 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU135710 | lncRNA | upstream | 133211 | 933515 ~ 933825 (+) | True | G108496 |
| TU135441 | lncRNA | upstream | 276203 | 789976 ~ 790833 (+) | True | G108322 |
| TU135422 | lncRNA | upstream | 284561 | 782025 ~ 782475 (+) | True | G108308 |
| TU135434 | lncRNA | upstream | 292997 | 773659 ~ 774039 (+) | True | G108318 |
| TU135429 | lncRNA | upstream | 336850 | 727877 ~ 730186 (+) | True | G108314 |
| TU135744 | lncRNA | downstream | 2602 | 1070327 ~ 1070771 (+) | True | G108515 |
| TU135746 | lncRNA | downstream | 3569 | 1071294 ~ 1071772 (+) | True | G108516 |
| TU135751 | lncRNA | downstream | 95139 | 1162864 ~ 1193441 (+) | True | G108519 |
| TU135752 | lncRNA | downstream | 95139 | 1162864 ~ 1193441 (+) | False | G108519 |
| TU135754 | lncRNA | downstream | 95139 | 1162864 ~ 1193441 (+) | False | G108519 |
| AMCG00006257 | mRNA | upstream | 27756 | 1026203 ~ 1039280 (+) | True | AMCG00006257 |
| AMCG00006256 | mRNA | upstream | 63165 | 986337 ~ 1003871 (+) | True | AMCG00006256 |
| AMCG00006254 | mRNA | upstream | 84351 | 974658 ~ 982685 (+) | True | AMCG00006254 |
| AMCG00006253 | mRNA | upstream | 107133 | 950922 ~ 959903 (+) | True | AMCG00006253 |
| AMCG00006249 | mRNA | upstream | 120388 | 932159 ~ 946648 (+) | True | AMCG00006249 |
| AMCG00006261 | mRNA | downstream | 9568 | 1077293 ~ 1085987 (+) | True | AMCG00006261 |
| AMCG00006262 | mRNA | downstream | 21866 | 1089591 ~ 1098771 (+) | True | AMCG00006262 |
| AMCG00006264 | mRNA | downstream | 35055 | 1102780 ~ 1107716 (+) | True | AMCG00006264 |
| AMCG00006263 | mRNA | downstream | 76052 | 1143777 ~ 1147913 (+) | True | AMCG00006263 |
| AMCG00006270 | mRNA | downstream | 132096 | 1199821 ~ 1213094 (+) | True | AMCG00006270 |
| TU135722 | other | upstream | 76214 | 985873 ~ 990822 (+) | False | AMCG00006256 |
| TU135656 | other | upstream | 218264 | 846561 ~ 848772 (+) | False | AMCG00006246 |
| TU135436 | other | upstream | 275974 | 774809 ~ 791062 (+) | False | G108319 |
| TU135437 | other | upstream | 275974 | 774809 ~ 791062 (+) | True | G108319 |
| TU135365 | other | upstream | 633131 | 429763 ~ 433905 (+) | True | AMCG00006231 |
| TU135810 | other | downstream | 212976 | 1280701 ~ 1286052 (+) | True | AMCG00006276 |
| TU135836 | other | downstream | 282658 | 1350383 ~ 1429987 (+) | True | G108585 |
| TU135921 | other | downstream | 668207 | 1735932 ~ 1739267 (+) | True | AMCG00006294 |
| TU135896 | other | downstream | 740832 | 1808557 ~ 1812675 (+) | False | G108626 |
| TU136837 | other | downstream | 2293629 | 3361354 ~ 3365565 (+) | False | G109309 |
