RNA id: TU135744


Basic Information

Item Value
RNA id TU135744
length 282
lncRNA type inter_gene
GC content 0.44
exon number 3
gene id G108515
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1070327 ~ 1070771 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtgatacagtccagtccagtgtaatacagtccagtgtgatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135742 lncRNA upstream 2602 1067036 ~ 1067725 (+) True G108513
TU135710 lncRNA upstream 136502 933515 ~ 933825 (+) True G108496
TU135441 lncRNA upstream 279494 789976 ~ 790833 (+) True G108322
TU135422 lncRNA upstream 287852 782025 ~ 782475 (+) True G108308
TU135434 lncRNA upstream 296288 773659 ~ 774039 (+) True G108318
TU135746 lncRNA downstream 523 1071294 ~ 1071772 (+) True G108516
TU135751 lncRNA downstream 92093 1162864 ~ 1193441 (+) True G108519
TU135752 lncRNA downstream 92093 1162864 ~ 1193441 (+) False G108519
TU135754 lncRNA downstream 92093 1162864 ~ 1193441 (+) False G108519
TU135776 lncRNA downstream 130523 1201294 ~ 1201681 (+) True G108540
AMCG00006257 mRNA upstream 31047 1026203 ~ 1039280 (+) True AMCG00006257
AMCG00006256 mRNA upstream 66456 986337 ~ 1003871 (+) True AMCG00006256
AMCG00006254 mRNA upstream 87642 974658 ~ 982685 (+) True AMCG00006254
AMCG00006253 mRNA upstream 110424 950922 ~ 959903 (+) True AMCG00006253
AMCG00006249 mRNA upstream 123679 932159 ~ 946648 (+) True AMCG00006249
AMCG00006261 mRNA downstream 6522 1077293 ~ 1085987 (+) True AMCG00006261
AMCG00006262 mRNA downstream 18820 1089591 ~ 1098771 (+) True AMCG00006262
AMCG00006264 mRNA downstream 32009 1102780 ~ 1107716 (+) True AMCG00006264
AMCG00006263 mRNA downstream 73006 1143777 ~ 1147913 (+) True AMCG00006263
AMCG00006270 mRNA downstream 129050 1199821 ~ 1213094 (+) True AMCG00006270
TU135722 other upstream 79505 985873 ~ 990822 (+) False AMCG00006256
TU135656 other upstream 221555 846561 ~ 848772 (+) False AMCG00006246
TU135436 other upstream 279265 774809 ~ 791062 (+) False G108319
TU135437 other upstream 279265 774809 ~ 791062 (+) True G108319
TU135365 other upstream 636422 429763 ~ 433905 (+) True AMCG00006231
TU135810 other downstream 209930 1280701 ~ 1286052 (+) True AMCG00006276
TU135836 other downstream 279612 1350383 ~ 1429987 (+) True G108585
TU135921 other downstream 665161 1735932 ~ 1739267 (+) True AMCG00006294
TU135896 other downstream 737786 1808557 ~ 1812675 (+) False G108626
TU136837 other downstream 2290583 3361354 ~ 3365565 (+) False G109309

Expression Profile