RNA id: TU135930


Basic Information

Item Value
RNA id TU135930
length 249
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G108655
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 933515 ~ 933825 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtgtccagtcagtgttaatgtgctgtagtgtccagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtactgtagtgtccagtcagtcagtgttaatgtcctgtagtgttcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcag

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135702 lncRNA downstream 24487 907890 ~ 909028 (-) True G108491
TU135693 lncRNA downstream 43713 889073 ~ 889802 (-) True G108484
TU135674 lncRNA downstream 59022 869277 ~ 874493 (-) False AMCG00006247
TU135687 lncRNA downstream 75200 857794 ~ 858315 (-) True G108480
TU135684 lncRNA downstream 77843 852284 ~ 855672 (-) True G108478
TU135942 lncRNA upstream 19467 953292 ~ 958678 (-) True G108664
TU135972 lncRNA upstream 106393 1040218 ~ 1098717 (-) False G108689
TU135975 lncRNA upstream 159039 1092864 ~ 1101292 (-) False G108689
TU135974 lncRNA upstream 160899 1094724 ~ 1098717 (-) True G108689
TU135995 lncRNA upstream 175826 1109651 ~ 1119698 (-) True G108705
AMCG00006255 mRNA downstream 32670 896978 ~ 900845 (-) True AMCG00006255
AMCG00006247 mRNA downstream 59021 869356 ~ 874494 (-) False AMCG00006247
AMCG00006248 mRNA downstream 147930 774474 ~ 785585 (-) True AMCG00006248
AMCG00006245 mRNA downstream 184779 726103 ~ 748736 (-) True AMCG00006245
AMCG00006244 mRNA downstream 213122 711832 ~ 720393 (-) True AMCG00006244
AMCG00006259 mRNA upstream 109037 1042862 ~ 1047510 (-) True AMCG00006259
AMCG00006260 mRNA upstream 114353 1048178 ~ 1049728 (-) True AMCG00006260
AMCG00006258 mRNA upstream 134229 1068054 ~ 1073294 (-) True AMCG00006258
AMCG00006266 mRNA upstream 201109 1134934 ~ 1137945 (-) True AMCG00006266
AMCG00006265 mRNA upstream 222902 1156727 ~ 1160200 (-) True AMCG00006265
TU135631 other downstream 193226 737260 ~ 740289 (-) False AMCG00006245
TU135628 other downstream 198105 731441 ~ 735410 (-) False AMCG00006245
TU135562 other downstream 387369 479582 ~ 546146 (-) False AMCG00006241
TU135541 other downstream 537536 395424 ~ 395979 (-) False AMCG00006232
TU135530 other downstream 593567 336736 ~ 339948 (-) True G108379
TU136000 other upstream 192737 1126562 ~ 1134690 (-) True G108708
TU136027 other upstream 281400 1215225 ~ 1216184 (-) False AMCG00006274
TU136062 other upstream 403362 1337187 ~ 1341445 (-) True AMCG00006277
TU136064 other upstream 410691 1344516 ~ 1623374 (-) False AMCG00006292
TU136068 other upstream 416660 1350485 ~ 1352941 (-) False G108755

Expression Profile