RNA id: TU136184



Basic Information


Item Value
RNA id TU136184
length 320
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G108847
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1952214 ~ 1953042 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGTATATTCCGATGATATGAAAATACAGCTACaacaaaatgacattaaaatattggTGTGGACTGTGCTGTTTGTTTCCCGTTTTCTCTCACAGCTCTGGGCGGCAGACCTGTCACATCCGCTTCACAACAGCAGAGCCAGACATCAGGGTCATTTGTACTAAAGCACtgaacacacaatcacacacaggcGAAGCGCAGCTgcacattgaaatgtatttcccGAAAAAGACGACAGAAAGCAAAACGGCGTCCCTGTCCTTTTGAACGATCAGCTATTTAGCTCTTTCATCAACCTCCATTTCCTATAAcataattttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU136169 lncRNA upstream 58727 1892863 ~ 1893487 (+) True G108833
TU136168 lncRNA upstream 59789 1891036 ~ 1892425 (+) True G108832
TU136167 lncRNA upstream 62179 1889527 ~ 1890035 (+) True G108831
TU135894 lncRNA upstream 137604 1808557 ~ 1814610 (+) False G108626
TU135890 lncRNA upstream 273707 1676666 ~ 1678507 (+) False G108626
TU136191 lncRNA downstream 38573 1991615 ~ 2011808 (+) True G108854
TU136194 lncRNA downstream 55045 2008087 ~ 2033572 (+) True G108856
TU136219 lncRNA downstream 145307 2098349 ~ 2128000 (+) True G108878
TU136226 lncRNA downstream 175276 2128318 ~ 2130263 (+) True G108884
TU136237 lncRNA downstream 206935 2159977 ~ 2252346 (+) True G108890
AMCG00006308 mRNA upstream 44128 1896505 ~ 1908086 (+) True AMCG00006308
AMCG00006303 mRNA upstream 64644 1883754 ~ 1887570 (+) True AMCG00006303
AMCG00006301 mRNA upstream 72134 1877557 ~ 1880080 (+) True AMCG00006301
AMCG00006306 mRNA upstream 86908 1860979 ~ 1865306 (+) True AMCG00006306
AMCG00006300 mRNA upstream 146174 1805301 ~ 1806040 (+) True AMCG00006300
AMCG00006309 mRNA downstream 88974 2042016 ~ 2045884 (+) True AMCG00006309
AMCG00006311 mRNA downstream 107157 2060199 ~ 2068535 (+) True AMCG00006311
AMCG00006312 mRNA downstream 115708 2068750 ~ 2073323 (+) True AMCG00006312
AMCG00006310 mRNA downstream 127490 2080532 ~ 2089002 (+) True AMCG00006310
AMCG00006317 mRNA downstream 181314 2134356 ~ 2137701 (+) True AMCG00006317
TU135896 other upstream 139539 1808557 ~ 1812675 (+) False G108626
TU135921 other upstream 212947 1735932 ~ 1739267 (+) True AMCG00006294
TU135836 other upstream 522227 1350383 ~ 1429987 (+) True G108585
TU135810 other upstream 666162 1280701 ~ 1286052 (+) True AMCG00006276
TU135722 other upstream 961392 985873 ~ 990822 (+) False AMCG00006256
TU136837 other downstream 1408312 3361354 ~ 3365565 (+) False G109309
TU136897 other downstream 1550139 3503181 ~ 3506679 (+) True G109362
TU136948 other downstream 1616997 3570039 ~ 3573709 (+) False AMCG00006379
TU136955 other downstream 1646199 3599241 ~ 3599697 (+) False AMCG00006385
TU136960 other downstream 1684701 3637743 ~ 3640661 (+) False AMCG00006387

Expression Profile