RNA id: TU136688


Basic Information

Item Value
RNA id TU136688
length 270
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G109218
representative False

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3016779 ~ 3069228 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAGTCAGCTCAGTACAGGCAGTGACACTTCAGCATAGGGACACTCTTATCGACAGTGTATtagcacagcagcagcagagtaTTTTGGAGCAGTGTGTCCATCTAGTATCAGCAGAGAAAAGGGAGAACTGGACACCGACAGCATGAGAGGAGCCAGCTCTCTCCCCATTCTGCTTCTGCTGCTGACCTCACTGGGctgtgagagaggagagagccaGGCCACAACCTCCAGTTTTACTGAATCCCAGACTCCATCCTCCCCCAGCACCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136405 lncRNA upstream 498245 2436058 ~ 2518534 (+) False G109011
TU136404 lncRNA upstream 563950 2436058 ~ 2452829 (+) True G109011
TU136402 lncRNA upstream 613628 2402903 ~ 2403151 (+) True G109010
TU136392 lncRNA upstream 660541 2350754 ~ 2356238 (+) True G109004
TU136373 lncRNA upstream 723883 2292697 ~ 2292896 (+) True G108987
TU136755 lncRNA downstream 165677 3234905 ~ 3236401 (+) True G109260
TU136762 lncRNA downstream 178641 3247869 ~ 3252080 (+) False AMCG00006366
TU136782 lncRNA downstream 213908 3283136 ~ 3286179 (+) True AMCG00006368
TU136826 lncRNA downstream 270861 3340089 ~ 3393931 (+) True G109301
TU136838 lncRNA downstream 292126 3361354 ~ 3363115 (+) True G109309
AMCG00006359 mRNA upstream 15489 2989143 ~ 3001290 (+) True AMCG00006359
AMCG00006353 mRNA upstream 56247 2955335 ~ 2960532 (+) True AMCG00006353
AMCG00006352 mRNA upstream 72307 2936943 ~ 2944472 (+) True AMCG00006352
AMCG00006358 mRNA upstream 82218 2908172 ~ 2934561 (+) True AMCG00006358
AMCG00006347 mRNA upstream 134562 2866303 ~ 2882217 (+) True AMCG00006347
AMCG00006360 mRNA downstream 24854 3094082 ~ 3111575 (+) True AMCG00006360
AMCG00006364 mRNA downstream 81844 3151072 ~ 3177539 (+) True AMCG00006364
AMCG00006367 mRNA downstream 150991 3220219 ~ 3232977 (+) True AMCG00006367
AMCG00006366 mRNA downstream 173709 3242937 ~ 3251497 (+) True AMCG00006366
AMCG00006368 mRNA downstream 205554 3274782 ~ 3285081 (+) False AMCG00006368
TU135896 other upstream 1204104 1808557 ~ 1812675 (+) False G108626
TU135921 other upstream 1277512 1735932 ~ 1739267 (+) True AMCG00006294
TU135836 other upstream 1586792 1350383 ~ 1429987 (+) True G108585
TU135810 other upstream 1730727 1280701 ~ 1286052 (+) True AMCG00006276
TU135722 other upstream 2025957 985873 ~ 990822 (+) False AMCG00006256
TU136837 other downstream 292126 3361354 ~ 3365565 (+) False G109309
TU136897 other downstream 433953 3503181 ~ 3506679 (+) True G109362
TU136948 other downstream 500811 3570039 ~ 3573709 (+) False AMCG00006379
TU136955 other downstream 530013 3599241 ~ 3599697 (+) False AMCG00006385
TU136960 other downstream 568515 3637743 ~ 3640661 (+) False AMCG00006387

Expression Profile