RNA id: TU137227


Basic Information

Item Value
RNA id TU137227
length 251
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G109597
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4230234 ~ 4230484 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aagcaaagtaaaaaccacagggaaaaaataagagagagaACATTCTCTACTGGGAGATAAATCCAGGTCTGATCCTTCCTGAATTTGACATTTTCGGAGATCACTGGTGTAAAATAATGGCCTCCCACTCTCCCAGACACCAACAACCGTGTTCCCTTTTAAACGCACAACCTCCCATTATTGCTTCTTCTCTACCATCAGATTTAGCAGTCCCAATTGACAATCCACTCTGCACTTCTTCAGGAGGAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137205 lncRNA upstream 61128 4168084 ~ 4169106 (+) True G109575
TU137202 lncRNA upstream 71043 4157736 ~ 4159191 (+) True G109573
TU137201 lncRNA upstream 73265 4156442 ~ 4156969 (+) True G109572
TU137200 lncRNA upstream 74028 4155964 ~ 4156206 (+) True G109571
TU137159 lncRNA upstream 194926 3976728 ~ 4035308 (+) True G109541
TU137307 lncRNA downstream 84147 4314631 ~ 4316465 (+) True G109656
TU137312 lncRNA downstream 98385 4328869 ~ 4329278 (+) True G109660
TU137314 lncRNA downstream 103839 4334323 ~ 4335450 (+) True G109662
TU137306 lncRNA downstream 143664 4374148 ~ 4377377 (+) True G109655
TU137383 lncRNA downstream 237907 4468391 ~ 4473008 (+) True G109713
AMCG00006424 mRNA upstream 40148 4187593 ~ 4190086 (+) True AMCG00006424
AMCG00006423 mRNA upstream 44924 4179050 ~ 4185310 (+) True AMCG00006423
AMCG00006413 mRNA upstream 62282 4160202 ~ 4167952 (+) True AMCG00006413
AMCG00006412 mRNA upstream 78543 4147704 ~ 4151691 (+) True AMCG00006412
AMCG00006420 mRNA upstream 95668 4133868 ~ 4134566 (+) True AMCG00006420
AMCG00006432 mRNA downstream 23850 4254334 ~ 4266243 (+) True AMCG00006432
AMCG00006433 mRNA downstream 121168 4351652 ~ 4360196 (+) True AMCG00006433
AMCG00006438 mRNA downstream 211477 4441961 ~ 4450469 (+) True AMCG00006438
AMCG00006446 mRNA downstream 258013 4488497 ~ 4496374 (+) True AMCG00006446
AMCG00006444 mRNA downstream 265922 4496406 ~ 4516083 (+) True AMCG00006444
TU137203 other upstream 68261 4159523 ~ 4161973 (+) False AMCG00006413
TU137199 other upstream 74485 4152816 ~ 4155749 (+) True G109570
TU137156 other upstream 266238 3963597 ~ 3963996 (+) True G109538
TU137096 other upstream 366964 3859273 ~ 3863270 (+) True AMCG00006393
TU136960 other upstream 589573 3637743 ~ 3640661 (+) False AMCG00006387
TU137384 other downstream 246450 4476934 ~ 4477570 (+) True G109714
TU137394 other downstream 294322 4524806 ~ 4527738 (+) True AMCG00006445
TU137460 other downstream 794411 5024895 ~ 5025906 (+) True G109781
TU137474 other downstream 850397 5080881 ~ 5098698 (+) True G109795
TU137475 other downstream 850397 5080881 ~ 5098698 (+) False G109795

Expression Profile