RNA id: TU137384



Basic Information


Item Value
RNA id TU137384
length 637
RNA type TUCP
GC content 0.47
exon number 1
gene id G109714
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4476934 ~ 4477570 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACAGTCAGTCCTAATGGACAACTCTAATGTGCCTGTGCTCTATTCCTGCTCTCCTGCAGCGACTCCAGGGAGTGAGGACAGCAGCTCTGTCTCTGCGTCCCTTTTCCACACCGTCTACACCTCCTTCATCGCCTGTGGCCTGGCTGCCATGATCTCTGCGGTGATTGTGACCGAGATCAAGAGCCGACAGAGGGGAGAGAGCCAGAGGGAGCCTGGGGAGCTGCCATAGGGACACGGACATTAAACATCTACTTCTCATTGCAAATCTCTAGAATAAATTGATAGGAATACAGGAGGATGTCCTAGCAGTGTCTGAGGGATCTGGTCTCAGTGTCCCTGCAGGTCAAGGCTCCTCAACTCCAGTCCCTCAGAAGTCCAGTCTAGCAGGTTTTAGTGTCCATTTTAAACAACACCACTACAGAGTCAGTGTTTTACCCTGGAAATAGTGGGAGAGCAAACCACGAGTTCATGGAGAAACTGAGGAGGAATGAAAACCTGAACATCCTGCAATAATCAAGGACTGAAGTTCATTCTAATTATGTTTTGAGTTGTTTTCATGCTTTCACtcttttgtgtatgttttttacaATGTGTGTCTCTTTTGTAGCAGGAAATATGTCAATATTATGAGTCATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137383 lncRNA upstream 3926 4468391 ~ 4473008 (+) True G109713
TU137306 lncRNA upstream 99557 4374148 ~ 4377377 (+) True G109655
TU137314 lncRNA upstream 141484 4334323 ~ 4335450 (+) True G109662
TU137312 lncRNA upstream 147656 4328869 ~ 4329278 (+) True G109660
TU137307 lncRNA upstream 160469 4314631 ~ 4316465 (+) True G109656
TU137391 lncRNA downstream 41347 4518917 ~ 4521249 (+) True G109721
TU137446 lncRNA downstream 445562 4923132 ~ 4924794 (+) True G109767
TU137458 lncRNA downstream 540519 5018089 ~ 5020403 (+) True G109779
TU137459 lncRNA downstream 543726 5021296 ~ 5022178 (+) True G109780
TU137465 lncRNA downstream 566846 5044416 ~ 5044633 (+) True G109786
AMCG00006438 mRNA upstream 26465 4441961 ~ 4450469 (+) True AMCG00006438
AMCG00006433 mRNA upstream 116738 4351652 ~ 4360196 (+) True AMCG00006433
AMCG00006432 mRNA upstream 210691 4254334 ~ 4266243 (+) True AMCG00006432
AMCG00006424 mRNA upstream 286848 4187593 ~ 4190086 (+) True AMCG00006424
AMCG00006423 mRNA upstream 291624 4179050 ~ 4185310 (+) True AMCG00006423
AMCG00006446 mRNA downstream 10927 4488497 ~ 4496374 (+) True AMCG00006446
AMCG00006444 mRNA downstream 18836 4496406 ~ 4516083 (+) True AMCG00006444
AMCG00006445 mRNA downstream 47238 4524808 ~ 4525972 (+) False AMCG00006445
AMCG00006442 mRNA downstream 64542 4542112 ~ 4562075 (+) True AMCG00006442
AMCG00006443 mRNA downstream 92954 4570524 ~ 4571515 (+) True AMCG00006443
TU137203 other upstream 314961 4159523 ~ 4161973 (+) False AMCG00006413
TU137199 other upstream 321185 4152816 ~ 4155749 (+) True G109570
TU137156 other upstream 512938 3963597 ~ 3963996 (+) True G109538
TU137096 other upstream 613664 3859273 ~ 3863270 (+) True AMCG00006393
TU136960 other upstream 836273 3637743 ~ 3640661 (+) False AMCG00006387
TU137394 other downstream 47236 4524806 ~ 4527738 (+) True AMCG00006445
TU137460 other downstream 547325 5024895 ~ 5025906 (+) True G109781
TU137474 other downstream 603311 5080881 ~ 5098698 (+) True G109795
TU137475 other downstream 603311 5080881 ~ 5098698 (+) False G109795
TU137492 other downstream 649787 5127357 ~ 5128829 (+) False AMCG00006459

Expression Profile