RNA id: TU137465


Basic Information

Item Value
RNA id TU137465
length 218
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G109786
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5044416 ~ 5044633 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctgtttttgaatgttcccacattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttccatcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagactt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137459 lncRNA upstream 22238 5021296 ~ 5022178 (+) True G109780
TU137458 lncRNA upstream 24013 5018089 ~ 5020403 (+) True G109779
TU137446 lncRNA upstream 119622 4923132 ~ 4924794 (+) True G109767
TU137391 lncRNA upstream 523167 4518917 ~ 4521249 (+) True G109721
TU137383 lncRNA upstream 571408 4468391 ~ 4473008 (+) True G109713
TU137473 lncRNA downstream 54363 5098996 ~ 5106948 (+) False AMCG00006460
TU137535 lncRNA downstream 307823 5352456 ~ 5353170 (+) True G109837
TU137646 lncRNA downstream 501574 5546207 ~ 5546436 (+) True G109933
TU137710 lncRNA downstream 754967 5799600 ~ 5804559 (+) True G109978
TU137770 lncRNA downstream 939157 5983790 ~ 5984250 (+) True G110024
AMCG00006455 mRNA upstream 27730 5015646 ~ 5016686 (+) True AMCG00006455
AMCG00006452 mRNA upstream 76383 4961206 ~ 4968033 (+) True AMCG00006452
AMCG00006454 mRNA upstream 113507 4926843 ~ 4930909 (+) True AMCG00006454
AMCG00006453 mRNA upstream 117636 4921018 ~ 4926780 (+) True AMCG00006453
AMCG00006451 mRNA upstream 337979 4699666 ~ 4706437 (+) True AMCG00006451
AMCG00006461 mRNA downstream 35117 5079750 ~ 5090677 (+) True AMCG00006461
AMCG00006460 mRNA downstream 49638 5094271 ~ 5107022 (+) True AMCG00006460
AMCG00006459 mRNA downstream 83226 5127859 ~ 5134715 (+) True AMCG00006459
AMCG00006458 mRNA downstream 94909 5139542 ~ 5149792 (+) True AMCG00006458
AMCG00006468 mRNA downstream 111965 5156598 ~ 5181731 (+) True AMCG00006468
TU137460 other upstream 18510 5024895 ~ 5025906 (+) True G109781
TU137394 other upstream 516678 4524806 ~ 4527738 (+) True AMCG00006445
TU137384 other upstream 566846 4476934 ~ 4477570 (+) True G109714
TU137203 other upstream 882443 4159523 ~ 4161973 (+) False AMCG00006413
TU137199 other upstream 888667 4152816 ~ 4155749 (+) True G109570
TU137474 other downstream 36248 5080881 ~ 5098698 (+) True G109795
TU137475 other downstream 36248 5080881 ~ 5098698 (+) False G109795
TU137492 other downstream 82724 5127357 ~ 5128829 (+) False AMCG00006459
TU137762 other downstream 934429 5979062 ~ 5982909 (+) True G110023
TU137766 other downstream 936563 5981196 ~ 5982909 (+) False G110023

Expression Profile