RNA id: TU137499



Basic Information


Item Value
RNA id TU137499
length 227
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G109815
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5136518 ~ 5136744 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGCAGGTTATTTACTAACTTATTCATCCCATTTCTATTTGTTTCCCCAAAACATCATCATTACTCAGCACTTGTGAAGACTGCAGTGACTAGTATTACGTCTTCCACACAGCTATGACTAGGAAACCTGGGAACCTGTTAACTGTAGCAATGATTCATCTACAATATTGCcaataaaattaagtttaacATAATTTCTCACTTCATGTAGGACATAAATGGTatca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137461 lncRNA downstream 115843 5020037 ~ 5020675 (-) True G109782
TU137457 lncRNA downstream 165330 4970864 ~ 4971188 (-) True G109778
TU137436 lncRNA downstream 389284 4746970 ~ 4747234 (-) True G109761
TU137408 lncRNA downstream 615149 4515937 ~ 4521369 (-) True G109736
TU137407 lncRNA downstream 615149 4516055 ~ 4521369 (-) False G109736
TU137574 lncRNA upstream 208939 5345683 ~ 5347227 (-) True G109875
TU137582 lncRNA upstream 272596 5409340 ~ 5409571 (-) True G109878
TU137623 lncRNA upstream 298193 5434937 ~ 5435764 (-) True G109916
TU137664 lncRNA upstream 440726 5577470 ~ 5580727 (-) False AMCG00006476
TU137732 lncRNA upstream 665828 5802572 ~ 5803261 (-) True G109995
AMCG00006462 mRNA downstream 12890 5115716 ~ 5123628 (-) True AMCG00006462
AMCG00006463 mRNA downstream 22428 5111162 ~ 5114090 (-) True AMCG00006463
AMCG00006456 mRNA downstream 68778 5063461 ~ 5067740 (-) True AMCG00006456
AMCG00006457 mRNA downstream 85327 5017795 ~ 5051191 (-) True AMCG00006457
AMCG00006447 mRNA downstream 643988 4484214 ~ 4492530 (-) True AMCG00006447
AMCG00006470 mRNA upstream 213460 5350204 ~ 5390268 (-) True AMCG00006470
AMCG00006471 mRNA upstream 299799 5436543 ~ 5483801 (-) True AMCG00006471
AMCG00006473 mRNA upstream 373845 5510589 ~ 5513330 (-) True AMCG00006473
AMCG00006474 mRNA upstream 381927 5518671 ~ 5534047 (-) True AMCG00006474
AMCG00006472 mRNA upstream 414073 5550817 ~ 5551857 (-) True AMCG00006472
TU137277 other downstream 970918 4164934 ~ 4165600 (-) True G109633
TU136502 other downstream 2806527 2324131 ~ 2329991 (-) True AMCG00006328
TU136304 other downstream 3006263 2097818 ~ 2130255 (-) False G108938
TU136306 other downstream 3112375 2020001 ~ 2024143 (-) True AMCG00006313
TU136165 other downstream 3254681 1881282 ~ 1881837 (-) True G108829
TU137807 other upstream 877360 6014104 ~ 6016943 (-) False AMCG00006491
TU137903 other upstream 1648569 6785313 ~ 6785851 (-) True G110140
TU137983 other upstream 1941645 7078389 ~ 7088985 (-) True G110195
TU138386 other upstream 3585644 8722388 ~ 8724352 (-) True G110507
TU138401 other upstream 3651074 8787818 ~ 8794062 (-) True G110520

Expression Profile