RNA id: TU137917


Basic Information

Item Value
RNA id TU137917
length 331
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G110152
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 6820238 ~ 6820568 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacagttgacggattcactggcttacgaaccttttttctggacctggaccattctccctcttaaaccccggactgtctgacaacctcccactggtaacgaactttgattacggactgtgactacgaacctgccttgcccctgtcgTGCTTCTGTGTGCCCAGTGTTCGGCTCTATCGAcctgggcatttactgttattgttagtgtttgttttgtagttagggattgtttacgtttagttagtgctcggacagagctaggttttgttttgctttttgacactgtgcctgccatttagggaagcaataaaacaacagcaagcctgttttgta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137753 lncRNA downstream 964736 5853814 ~ 5855502 (-) True G110015
TU137733 lncRNA downstream 1015786 5803498 ~ 5804452 (-) True G109996
TU137732 lncRNA downstream 1016977 5802572 ~ 5803261 (-) True G109995
TU137664 lncRNA downstream 1239511 5577470 ~ 5580727 (-) False AMCG00006476
TU137623 lncRNA downstream 1384474 5434937 ~ 5435764 (-) True G109916
TU137931 lncRNA upstream 91308 6911876 ~ 6912252 (-) True G110165
TU137934 lncRNA upstream 116845 6937413 ~ 6937803 (-) True G110168
TU137935 lncRNA upstream 123619 6944187 ~ 6944474 (-) True G110169
TU137984 lncRNA upstream 286013 7106581 ~ 7107138 (-) False G110195
TU137992 lncRNA upstream 322686 7143254 ~ 7143678 (-) True G110202
AMCG00006503 mRNA downstream 40774 6778367 ~ 6779464 (-) True AMCG00006503
AMCG00006502 mRNA downstream 51447 6754781 ~ 6768791 (-) True AMCG00006502
AMCG00006498 mRNA downstream 602730 6191972 ~ 6217508 (-) True AMCG00006498
AMCG00006496 mRNA downstream 723095 6091225 ~ 6097143 (-) True AMCG00006496
AMCG00006493 mRNA downstream 752244 6051327 ~ 6067994 (-) True AMCG00006493
AMCG00006506 mRNA upstream 35168 6855736 ~ 6860515 (-) True AMCG00006506
AMCG00006507 mRNA upstream 176979 6997547 ~ 7004873 (-) True AMCG00006507
AMCG00006513 mRNA upstream 257752 7078320 ~ 7089125 (-) True AMCG00006513
AMCG00006512 mRNA upstream 278015 7098583 ~ 7106776 (-) True AMCG00006512
AMCG00006514 mRNA upstream 366119 7186687 ~ 7195504 (-) True AMCG00006514
TU137903 other downstream 34387 6785313 ~ 6785851 (-) True G110140
TU137807 other downstream 803295 6014104 ~ 6016943 (-) False AMCG00006491
TU137277 other downstream 2654638 4164934 ~ 4165600 (-) True G109633
TU136502 other downstream 4490247 2324131 ~ 2329991 (-) True AMCG00006328
TU136304 other downstream 4689983 2097818 ~ 2130255 (-) False G108938
TU137983 other upstream 257821 7078389 ~ 7088985 (-) True G110195
TU138386 other upstream 1901820 8722388 ~ 8724352 (-) True G110507
TU138401 other upstream 1967250 8787818 ~ 8794062 (-) True G110520
TU138464 other upstream 2177069 8997637 ~ 8999264 (-) True G110570
TU138509 other upstream 2724927 9545495 ~ 9552080 (-) False G110605

Expression Profile