RNA id: TU137934


Basic Information

Item Value
RNA id TU137934
length 391
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G110168
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 6937413 ~ 6937803 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TACTTTCATGACATTTCCACTAAGTCTCGCTTTACTTATGGATGGtgtaacgggttggggggccctgtcacaagaaagggctgtatgtaggcggggtctggtcttaaAACACCCAGTAGGGATGCAGgaagagggtacaaaacaggcttgctgtggttttattgcttcccttaatggcaggcacagtgtcaaaaagcaaaacaaaacctagctctgtccgagcactaactaaacggaaacaatccctaactacaaaacaaacactaacaataacagtaaatgcccgggtcgatagagccgaacaccgggcacACAGAAGCATAAAGGGAtaaggcaggttcgtagtcacagtccgtaatcaaagttcgttactGGTGGGgggttgtcagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137931 lncRNA downstream 25161 6911876 ~ 6912252 (-) True G110165
TU137917 lncRNA downstream 116845 6820238 ~ 6820568 (-) True G110152
TU137753 lncRNA downstream 1081911 5853814 ~ 5855502 (-) True G110015
TU137733 lncRNA downstream 1132961 5803498 ~ 5804452 (-) True G109996
TU137732 lncRNA downstream 1134152 5802572 ~ 5803261 (-) True G109995
TU137935 lncRNA upstream 6384 6944187 ~ 6944474 (-) True G110169
TU137984 lncRNA upstream 168778 7106581 ~ 7107138 (-) False G110195
TU137992 lncRNA upstream 205451 7143254 ~ 7143678 (-) True G110202
TU137997 lncRNA upstream 207754 7145557 ~ 7185532 (-) True G110204
TU138057 lncRNA upstream 546339 7484142 ~ 7484368 (-) True G110259
AMCG00006506 mRNA downstream 76898 6855736 ~ 6860515 (-) True AMCG00006506
AMCG00006503 mRNA downstream 157949 6778367 ~ 6779464 (-) True AMCG00006503
AMCG00006502 mRNA downstream 168622 6754781 ~ 6768791 (-) True AMCG00006502
AMCG00006498 mRNA downstream 719905 6191972 ~ 6217508 (-) True AMCG00006498
AMCG00006496 mRNA downstream 840270 6091225 ~ 6097143 (-) True AMCG00006496
AMCG00006507 mRNA upstream 59744 6997547 ~ 7004873 (-) True AMCG00006507
AMCG00006513 mRNA upstream 140517 7078320 ~ 7089125 (-) True AMCG00006513
AMCG00006512 mRNA upstream 160780 7098583 ~ 7106776 (-) True AMCG00006512
AMCG00006514 mRNA upstream 248884 7186687 ~ 7195504 (-) True AMCG00006514
AMCG00006520 mRNA upstream 655484 7593287 ~ 7621049 (-) True AMCG00006520
TU137903 other downstream 151562 6785313 ~ 6785851 (-) True G110140
TU137807 other downstream 920470 6014104 ~ 6016943 (-) False AMCG00006491
TU137277 other downstream 2771813 4164934 ~ 4165600 (-) True G109633
TU136502 other downstream 4607422 2324131 ~ 2329991 (-) True AMCG00006328
TU136304 other downstream 4807158 2097818 ~ 2130255 (-) False G108938
TU137983 other upstream 140586 7078389 ~ 7088985 (-) True G110195
TU138386 other upstream 1784585 8722388 ~ 8724352 (-) True G110507
TU138401 other upstream 1850015 8787818 ~ 8794062 (-) True G110520
TU138464 other upstream 2059834 8997637 ~ 8999264 (-) True G110570
TU138509 other upstream 2607692 9545495 ~ 9552080 (-) False G110605

Expression Profile