RNA id: TU137935


Basic Information

Item Value
RNA id TU137935
length 288
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G110169
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 6944187 ~ 6944474 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGAATCAGAAGGGAAGATTATACCAGGCCCTGAATCTGGAGAGCAGCCAGAGCAGCCAGAGCAGCCAGAGCAGCCGCAAAAGGAACAGCAGCCGCAGACGCTGCACTTAACTCAGTCGGGATCCCGGAAGACAGAGTCGCCGCAGCAACCAGAGGGTAAGACTCTTGTGCTTCCTCCATCAGGTCTGCTGAAAAACCAGAGTTCCTGTCCTCGACCTGAGTTCCTGGCTGCAGTAAAGGAGACGGAGACACCTCAGCGTGCCCAGGACTGGAGCAGAGACTGGAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137934 lncRNA downstream 6384 6937413 ~ 6937803 (-) True G110168
TU137931 lncRNA downstream 31935 6911876 ~ 6912252 (-) True G110165
TU137917 lncRNA downstream 123619 6820238 ~ 6820568 (-) True G110152
TU137753 lncRNA downstream 1088685 5853814 ~ 5855502 (-) True G110015
TU137733 lncRNA downstream 1139735 5803498 ~ 5804452 (-) True G109996
TU137984 lncRNA upstream 162107 7106581 ~ 7107138 (-) False G110195
TU137992 lncRNA upstream 198780 7143254 ~ 7143678 (-) True G110202
TU137997 lncRNA upstream 201083 7145557 ~ 7185532 (-) True G110204
TU138057 lncRNA upstream 539668 7484142 ~ 7484368 (-) True G110259
TU138059 lncRNA upstream 544784 7489258 ~ 7489469 (-) True G110261
AMCG00006506 mRNA downstream 83672 6855736 ~ 6860515 (-) True AMCG00006506
AMCG00006503 mRNA downstream 164723 6778367 ~ 6779464 (-) True AMCG00006503
AMCG00006502 mRNA downstream 175396 6754781 ~ 6768791 (-) True AMCG00006502
AMCG00006498 mRNA downstream 726679 6191972 ~ 6217508 (-) True AMCG00006498
AMCG00006496 mRNA downstream 847044 6091225 ~ 6097143 (-) True AMCG00006496
AMCG00006507 mRNA upstream 53073 6997547 ~ 7004873 (-) True AMCG00006507
AMCG00006513 mRNA upstream 133846 7078320 ~ 7089125 (-) True AMCG00006513
AMCG00006512 mRNA upstream 154109 7098583 ~ 7106776 (-) True AMCG00006512
AMCG00006514 mRNA upstream 242213 7186687 ~ 7195504 (-) True AMCG00006514
AMCG00006520 mRNA upstream 648813 7593287 ~ 7621049 (-) True AMCG00006520
TU137903 other downstream 158336 6785313 ~ 6785851 (-) True G110140
TU137807 other downstream 927244 6014104 ~ 6016943 (-) False AMCG00006491
TU137277 other downstream 2778587 4164934 ~ 4165600 (-) True G109633
TU136502 other downstream 4614196 2324131 ~ 2329991 (-) True AMCG00006328
TU136304 other downstream 4813932 2097818 ~ 2130255 (-) False G108938
TU137983 other upstream 133915 7078389 ~ 7088985 (-) True G110195
TU138386 other upstream 1777914 8722388 ~ 8724352 (-) True G110507
TU138401 other upstream 1843344 8787818 ~ 8794062 (-) True G110520
TU138464 other upstream 2053163 8997637 ~ 8999264 (-) True G110570
TU138509 other upstream 2601021 9545495 ~ 9552080 (-) False G110605

Expression Profile