RNA id: TU137984



Basic Information


Item Value
RNA id TU137984
length 432
lncRNA type sense_over
GC content 0.40
exon number 2
gene id G110195
representative False

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7078389 ~ 7107138 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTAACTCTTTTAACTGGAATATCCAGACTTTTAGGATTGACTATGTTTGTCTCTCTGACTTTGTTAAATCAAATACGTATATGCAGCTATTAAAATGGTTATATGTTTCTTAgcattattttaacacttgcCAAAGTTTGTTCAGGGGAATTAATCAAATgtcagtttgatttatttgaagacACAGAATCTATGTAGCTGATCTGATTAGTATCACAAAACGTCAATAACAGCAATGGCTGGAAAGGGTTCCTGTCCCCTGATCACCATACAGCCCTCAAGAGGACTCATAGATGAGAAGTTTCAAATCACTGTGAAGAATTTACTGCCAGGACAAGCCGTCACCCTGCACTCTCTGACTCAGTCCGAGGACAGTGACTTCTGGGAGGCATTTGGGCACTATGTCAGTGACGGTAAAGGGACAGTGAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137935 lncRNA downstream 162107 6944187 ~ 6944474 (-) True G110169
TU137934 lncRNA downstream 168778 6937413 ~ 6937803 (-) True G110168
TU137931 lncRNA downstream 194329 6911876 ~ 6912252 (-) True G110165
TU137917 lncRNA downstream 286013 6820238 ~ 6820568 (-) True G110152
TU137753 lncRNA downstream 1251079 5853814 ~ 5855502 (-) True G110015
TU137992 lncRNA upstream 36116 7143254 ~ 7143678 (-) True G110202
TU137997 lncRNA upstream 38419 7145557 ~ 7185532 (-) True G110204
TU138057 lncRNA upstream 377004 7484142 ~ 7484368 (-) True G110259
TU138059 lncRNA upstream 382120 7489258 ~ 7489469 (-) True G110261
TU138060 lncRNA upstream 399961 7507099 ~ 7507347 (-) True G110262
AMCG00006513 mRNA downstream 17456 7078320 ~ 7089125 (-) True AMCG00006513
AMCG00006507 mRNA downstream 101708 6997547 ~ 7004873 (-) True AMCG00006507
AMCG00006506 mRNA downstream 246066 6855736 ~ 6860515 (-) True AMCG00006506
AMCG00006503 mRNA downstream 327117 6778367 ~ 6779464 (-) True AMCG00006503
AMCG00006502 mRNA downstream 337790 6754781 ~ 6768791 (-) True AMCG00006502
AMCG00006514 mRNA upstream 79549 7186687 ~ 7195504 (-) True AMCG00006514
AMCG00006520 mRNA upstream 486149 7593287 ~ 7621049 (-) True AMCG00006520
AMCG00006522 mRNA upstream 548714 7655852 ~ 7666518 (-) True AMCG00006522
AMCG00006524 mRNA upstream 560482 7667620 ~ 7688311 (-) True AMCG00006524
AMCG00006523 mRNA upstream 587402 7694540 ~ 7718823 (-) True AMCG00006523
TU137983 other downstream 17596 7078389 ~ 7088985 (-) True G110195
TU137903 other downstream 320730 6785313 ~ 6785851 (-) True G110140
TU137807 other downstream 1089638 6014104 ~ 6016943 (-) False AMCG00006491
TU137277 other downstream 2940981 4164934 ~ 4165600 (-) True G109633
TU136502 other downstream 4776590 2324131 ~ 2329991 (-) True AMCG00006328
TU138386 other upstream 1615250 8722388 ~ 8724352 (-) True G110507
TU138401 other upstream 1680680 8787818 ~ 8794062 (-) True G110520
TU138464 other upstream 1890499 8997637 ~ 8999264 (-) True G110570
TU138509 other upstream 2438357 9545495 ~ 9552080 (-) False G110605
TU138641 other upstream 2980140 10087278 ~ 10107285 (-) True AMCG00006579

Expression Profile