RNA id: TU138043



Basic Information


Item Value
RNA id TU138043
length 203
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G110245
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7327030 ~ 7333170 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ccacatcactggggagtttgttccagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtccgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccacat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138035 lncRNA upstream 86473 7240086 ~ 7240557 (+) True G110240
TU137991 lncRNA upstream 183371 7143267 ~ 7143659 (+) True G110201
TU137933 lncRNA upstream 389366 6937244 ~ 6937664 (+) True G110167
TU137927 lncRNA upstream 469032 6855880 ~ 6857998 (+) True G110161
TU137910 lncRNA upstream 531036 6795749 ~ 6795994 (+) True G110147
TU138041 lncRNA downstream 260117 7593287 ~ 7633119 (+) True G110243
TU138100 lncRNA downstream 361384 7694554 ~ 7695513 (+) True G110286
TU138195 lncRNA downstream 580680 7913850 ~ 7914828 (+) True G110361
TU138275 lncRNA downstream 754867 8088037 ~ 8090127 (+) True G110429
TU138293 lncRNA downstream 799925 8133095 ~ 8135492 (+) True G110439
AMCG00006516 mRNA upstream 36361 7290004 ~ 7290669 (+) True AMCG00006516
AMCG00006515 mRNA upstream 91891 7226133 ~ 7235139 (+) True AMCG00006515
AMCG00006509 mRNA upstream 143927 7149305 ~ 7183103 (+) True AMCG00006509
AMCG00006508 mRNA upstream 210273 7109344 ~ 7116757 (+) True AMCG00006508
AMCG00006511 mRNA upstream 268515 7057638 ~ 7058515 (+) True AMCG00006511
AMCG00006517 mRNA downstream 150974 7484144 ~ 7490138 (+) True AMCG00006517
AMCG00006518 mRNA downstream 208643 7541813 ~ 7577273 (+) True AMCG00006518
AMCG00006519 mRNA downstream 318620 7651790 ~ 7652194 (+) True AMCG00006519
AMCG00006521 mRNA downstream 427644 7760814 ~ 7782870 (+) True AMCG00006521
AMCG00006525 mRNA downstream 474384 7807554 ~ 7812395 (+) True AMCG00006525
TU137929 other upstream 414776 6911876 ~ 6912254 (+) True G110163
TU137861 other upstream 738631 6519865 ~ 6588399 (+) True AMCG00006501
TU137762 other upstream 1344121 5979062 ~ 5982909 (+) True G110023
TU137766 other upstream 1344121 5981196 ~ 5982909 (+) False G110023
TU137492 other upstream 2198201 5127357 ~ 5128829 (+) False AMCG00006459
TU138093 other downstream 320502 7653672 ~ 7655194 (+) True G110279
TU138304 other downstream 842590 8175760 ~ 8176786 (+) True G110445
TU138383 other downstream 1389280 8722450 ~ 8724066 (+) True AMCG00006552
TU138516 other downstream 2233043 9566213 ~ 9567351 (+) False AMCG00006565
TU139270 other downstream 5678014 13011184 ~ 13043448 (+) True G111197

Expression Profile