RNA id: TU138068



Basic Information


Item Value
RNA id TU138068
length 364
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G110270
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7567204 ~ 7567567 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCCACTACACGGCCTCTGCTTCCGAATATGACCATGATGCTGCGACTCCAAGTCATCTCAGACACACCTAAGGGTGATGCTCAAGAGCTACTCAGAGATGGCACAGATATCAGACAGTGGAGGTAAGTACAGAAGTGCAGTTAATAAAGACAAGATGTAATGCGCTCCGTGGCACTGTGATTGTTCTAACACAAAAGGCAAGTAGGAGATTGTAGGACACCCACCATACTCGGGGACCTGGCCTGTCCCTCTCTTGAGAAGCAGCCGCACCCTCCTGCCTCCGGACTTGATGAGCTCGATGGCCCGGGCATGTGTCATGTCTCTCGTGCTCTCGCCGTTGATTTCTATGATTTGATCTCCGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138067 lncRNA downstream 8736 7558205 ~ 7558468 (-) True G110269
TU138065 lncRNA downstream 16097 7550859 ~ 7551107 (-) True G110267
TU138061 lncRNA downstream 44822 7521561 ~ 7522382 (-) True G110263
TU138060 lncRNA downstream 59857 7507099 ~ 7507347 (-) True G110262
TU138059 lncRNA downstream 77735 7489258 ~ 7489469 (-) True G110261
TU138069 lncRNA upstream 321 7567888 ~ 7568159 (-) True G110271
TU138126 lncRNA upstream 189058 7756625 ~ 7756852 (-) True G110309
TU138203 lncRNA upstream 339991 7907558 ~ 7909228 (-) True G110369
TU138400 lncRNA upstream 1216338 8783905 ~ 8794062 (-) False G110520
TU138472 lncRNA upstream 1442573 9010140 ~ 9014326 (-) True G110576
AMCG00006514 mRNA downstream 371700 7186687 ~ 7195504 (-) True AMCG00006514
AMCG00006512 mRNA downstream 460428 7098583 ~ 7106776 (-) True AMCG00006512
AMCG00006513 mRNA downstream 478079 7078320 ~ 7089125 (-) True AMCG00006513
AMCG00006507 mRNA downstream 562331 6997547 ~ 7004873 (-) True AMCG00006507
AMCG00006506 mRNA downstream 706689 6855736 ~ 6860515 (-) True AMCG00006506
AMCG00006520 mRNA upstream 25720 7593287 ~ 7621049 (-) True AMCG00006520
AMCG00006522 mRNA upstream 88285 7655852 ~ 7666518 (-) True AMCG00006522
AMCG00006524 mRNA upstream 100053 7667620 ~ 7688311 (-) True AMCG00006524
AMCG00006523 mRNA upstream 126973 7694540 ~ 7718823 (-) True AMCG00006523
AMCG00006526 mRNA upstream 216453 7784020 ~ 7801047 (-) True AMCG00006526
TU137983 other downstream 478219 7078389 ~ 7088985 (-) True G110195
TU137903 other downstream 781353 6785313 ~ 6785851 (-) True G110140
TU137807 other downstream 1550261 6014104 ~ 6016943 (-) False AMCG00006491
TU137277 other downstream 3401604 4164934 ~ 4165600 (-) True G109633
TU136502 other downstream 5237213 2324131 ~ 2329991 (-) True AMCG00006328
TU138386 other upstream 1154821 8722388 ~ 8724352 (-) True G110507
TU138401 other upstream 1220251 8787818 ~ 8794062 (-) True G110520
TU138464 other upstream 1430070 8997637 ~ 8999264 (-) True G110570
TU138509 other upstream 1977928 9545495 ~ 9552080 (-) False G110605
TU138641 other upstream 2519711 10087278 ~ 10107285 (-) True AMCG00006579

Expression Profile