RNA id: TU139614


Basic Information

Item Value
RNA id TU139614
length 298
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G111478
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14311727 ~ 14312024 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgagggaactgaaccttttcaccctggaacagaggagactacgtggggacttgattcaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttctttacacagagaggc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU139581 lncRNA downstream 11871 14182781 ~ 14299856 (-) False G111451
TU139585 lncRNA downstream 16178 14290467 ~ 14295549 (-) True G111452
TU139599 lncRNA downstream 65553 14244602 ~ 14246174 (-) True G111466
TU139582 lncRNA downstream 88399 14185608 ~ 14223328 (-) False G111451
TU139580 lncRNA downstream 88399 14216934 ~ 14223328 (-) True G111451
TU139617 lncRNA upstream 24677 14336701 ~ 14374310 (-) True G111481
TU139784 lncRNA upstream 399993 14712017 ~ 14713959 (-) True G111621
TU139789 lncRNA upstream 416947 14728971 ~ 14730469 (-) True G111622
TU139788 lncRNA upstream 417676 14729700 ~ 14730469 (-) False G111622
TU139793 lncRNA upstream 421146 14733170 ~ 14734171 (-) True G111626
AMCG00006681 mRNA downstream 41036 14252185 ~ 14270691 (-) True AMCG00006681
AMCG00006678 mRNA downstream 157395 14139065 ~ 14154332 (-) True AMCG00006678
AMCG00006676 mRNA downstream 178640 14130780 ~ 14133087 (-) True AMCG00006676
AMCG00006675 mRNA downstream 187969 14120438 ~ 14123758 (-) True AMCG00006675
AMCG00006677 mRNA downstream 208657 14101422 ~ 14103070 (-) True AMCG00006677
AMCG00006687 mRNA upstream 53618 14365642 ~ 14366487 (-) True AMCG00006687
AMCG00006690 mRNA upstream 64304 14376328 ~ 14388386 (-) True AMCG00006690
AMCG00006695 mRNA upstream 274725 14586749 ~ 14632771 (-) True AMCG00006695
AMCG00006696 mRNA upstream 332583 14644607 ~ 14665799 (-) True AMCG00006696
AMCG00006698 mRNA upstream 496837 14808861 ~ 14818516 (-) True AMCG00006698
TU139375 other downstream 808499 13455432 ~ 13503228 (-) True AMCG00006663
TU139243 other downstream 1433071 12876292 ~ 12878656 (-) False AMCG00006641
TU139244 other downstream 1433071 12876292 ~ 12878656 (-) True AMCG00006641
TU139089 other downstream 2171334 12137182 ~ 12140393 (-) True AMCG00006625
TU139024 other downstream 2287179 12017882 ~ 12024548 (-) False AMCG00006618
TU139625 other upstream 48204 14360228 ~ 14364422 (-) True G111489
TU139783 other upstream 413627 14725651 ~ 14753970 (-) False G111621
TU139786 other upstream 413627 14725651 ~ 14753970 (-) False G111621
TU139946 other upstream 1440797 15752821 ~ 15753235 (-) True G111767
TU140351 other upstream 3320867 17632891 ~ 17633445 (-) True G112059

Expression Profile