RNA id: TU139903


Basic Information

Item Value
RNA id TU139903
length 259
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G111730
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15557943 ~ 15558201 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgcacacagtatccagatgagctctaactagcgcattgtacagtctgaacattactgcccttgttctcaattctacacttttgacaatatatcctaacatcctgtttgcttttttattgcttccccacattgtttggatggagaaagtgaggagtccacatagactcctaggtctttctcatgtgttacttcatctagttct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU139901 lncRNA downstream 20107 15537476 ~ 15537836 (-) True G111728
TU139797 lncRNA downstream 762994 14794718 ~ 14794949 (-) True G111630
TU139793 lncRNA downstream 823772 14733170 ~ 14734171 (-) True G111626
TU139789 lncRNA downstream 827474 14728971 ~ 14730469 (-) True G111622
TU139788 lncRNA downstream 827474 14729700 ~ 14730469 (-) False G111622
TU139912 lncRNA upstream 99797 15657998 ~ 15659412 (-) True G111736
TU139937 lncRNA upstream 170412 15728613 ~ 15729533 (-) True G111759
TU139944 lncRNA upstream 184245 15742446 ~ 15742715 (-) True G111765
TU140035 lncRNA upstream 322929 15881130 ~ 15896843 (-) False AMCG00006719
TU140185 lncRNA upstream 1304476 16862677 ~ 16862967 (-) True G111940
AMCG00006702 mRNA downstream 630601 14905548 ~ 14927342 (-) True AMCG00006702
AMCG00006698 mRNA downstream 739427 14808861 ~ 14818516 (-) True AMCG00006698
AMCG00006696 mRNA downstream 892144 14644607 ~ 14665799 (-) True AMCG00006696
AMCG00006695 mRNA downstream 925172 14586749 ~ 14632771 (-) True AMCG00006695
AMCG00006690 mRNA downstream 1169557 14376328 ~ 14388386 (-) True AMCG00006690
AMCG00006706 mRNA upstream 6398 15564599 ~ 15574755 (-) True AMCG00006706
AMCG00006707 mRNA upstream 69015 15627216 ~ 15631171 (-) True AMCG00006707
AMCG00006711 mRNA upstream 128491 15686692 ~ 15691047 (-) True AMCG00006711
AMCG00006712 mRNA upstream 144173 15702374 ~ 15704607 (-) True AMCG00006712
AMCG00006718 mRNA upstream 176464 15734665 ~ 15735290 (-) True AMCG00006718
TU139783 other downstream 803973 14725651 ~ 14753970 (-) False G111621
TU139786 other downstream 803973 14725651 ~ 14753970 (-) False G111621
TU139625 other downstream 1193521 14360228 ~ 14364422 (-) True G111489
TU139375 other downstream 2054715 13455432 ~ 13503228 (-) True AMCG00006663
TU139244 other downstream 2679287 12876292 ~ 12878656 (-) True AMCG00006641
TU139946 other upstream 194620 15752821 ~ 15753235 (-) True G111767
TU140351 other upstream 2074690 17632891 ~ 17633445 (-) True G112059
TU140430 other upstream 2781069 18339270 ~ 18341210 (-) False AMCG00006754
TU140642 other upstream 4075036 19633237 ~ 19635925 (-) False AMCG00006774
TU140776 other upstream 4677655 20235856 ~ 20236206 (-) True G112420

Expression Profile