RNA id: TU140185



Basic Information


Item Value
RNA id TU140185
length 291
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G111940
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 16862677 ~ 16862967 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCCCGGATTGGTAATGCCACAATCTGATGTCTGAGAAATACAAAAGAAACCTATTTTAACAAGGACTATTCCTTGTATATTTAGCCATCCAAAAACTGTAGAAAAAGTTGAcgatgttgttttgttgttgaagtAACTTTGTTTCTGCCTCCCCACCCCTCTGCTGTTACAATGGTTCTGAAATATTGATTTCACTTCTTGTTTTCCAGAGTCCTTTGCATGTAAGCATTGTCCAGATCAAATGACTTTATTAAAGGCAACAAGGCCTGTTGTGAAGCCTGTGACGTGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU140035 lncRNA downstream 965834 15881130 ~ 15896843 (-) False AMCG00006719
TU139944 lncRNA downstream 1119962 15742446 ~ 15742715 (-) True G111765
TU139937 lncRNA downstream 1133144 15728613 ~ 15729533 (-) True G111759
TU139912 lncRNA downstream 1203265 15657998 ~ 15659412 (-) True G111736
TU139903 lncRNA downstream 1304476 15557943 ~ 15558201 (-) True G111730
TU140191 lncRNA upstream 35452 16898419 ~ 16901537 (-) True G111945
TU140192 lncRNA upstream 35452 16898419 ~ 16901537 (-) False G111945
TU140193 lncRNA upstream 35452 16898419 ~ 16899893 (-) False G111945
TU140194 lncRNA upstream 35452 16898419 ~ 16901537 (-) False G111945
TU140283 lncRNA upstream 246010 17108977 ~ 17327586 (-) True G112020
AMCG00006736 mRNA downstream 900 16861107 ~ 16861777 (-) True AMCG00006736
AMCG00006735 mRNA downstream 27637 16800846 ~ 16835040 (-) True AMCG00006735
AMCG00006734 mRNA downstream 79120 16716275 ~ 16783557 (-) True AMCG00006734
AMCG00006723 mRNA downstream 800867 16051366 ~ 16061810 (-) True AMCG00006723
AMCG00006722 mRNA downstream 823289 16032419 ~ 16039388 (-) True AMCG00006722
AMCG00006737 mRNA upstream 197396 17060363 ~ 17072397 (-) True AMCG00006737
AMCG00006740 mRNA upstream 281732 17144699 ~ 17271736 (-) True AMCG00006740
AMCG00006741 mRNA upstream 463662 17326629 ~ 17327076 (-) True AMCG00006741
AMCG00006743 mRNA upstream 540659 17403626 ~ 17406828 (-) True AMCG00006743
AMCG00006746 mRNA upstream 909000 17771967 ~ 17793459 (-) True AMCG00006746
TU139946 other downstream 1109442 15752821 ~ 15753235 (-) True G111767
TU139783 other downstream 2108707 14725651 ~ 14753970 (-) False G111621
TU139786 other downstream 2108707 14725651 ~ 14753970 (-) False G111621
TU139625 other downstream 2498255 14360228 ~ 14364422 (-) True G111489
TU139375 other downstream 3359449 13455432 ~ 13503228 (-) True AMCG00006663
TU140351 other upstream 769924 17632891 ~ 17633445 (-) True G112059
TU140430 other upstream 1476303 18339270 ~ 18341210 (-) False AMCG00006754
TU140642 other upstream 2770270 19633237 ~ 19635925 (-) False AMCG00006774
TU140776 other upstream 3372889 20235856 ~ 20236206 (-) True G112420
TU140946 other upstream 3991090 20854057 ~ 20949836 (-) False AMCG00006813

Expression Profile