RNA id: TU140776


Basic Information

Item Value
RNA id TU140776
length 351
RNA type TUCP
GC content 0.45
exon number 1
gene id G112420
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 20235856 ~ 20236206 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tggttccaaacttcttccatttatggatgatggaggccactgtgctcattgggaccttcaatgctgcagacatttttctgtacccttccgcagatctgtgcctcgatacaatcctgtctcggaggtctacagacaattccttggacttcatggcttggtttgtgctctgacatgcactgttaactgtgggaccttatatagacaggtgtgtgcctttccaaatcatgtccagtcaactgaatttaccacaggtggactccaatcaagttgtagaaacatctcaaggatgatcagtggaaacaggatgcacctgagctcaattttgagtgtcatggcaaaggctgtgaatat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU140765 lncRNA downstream 156445 20078891 ~ 20079411 (-) True G112410
TU140629 lncRNA downstream 603961 19623221 ~ 19631895 (-) False AMCG00006773
TU140630 lncRNA downstream 603961 19623221 ~ 19631895 (-) False AMCG00006773
TU140619 lncRNA downstream 666184 19568517 ~ 19569672 (-) True G112292
TU140617 lncRNA downstream 669841 19564956 ~ 19566015 (-) True G112290
TU140855 lncRNA upstream 411114 20647320 ~ 20649616 (-) False AMCG00006807
TU140857 lncRNA upstream 414835 20651041 ~ 20652840 (-) True AMCG00006807
TU140858 lncRNA upstream 414835 20651041 ~ 20653659 (-) False AMCG00006807
TU140871 lncRNA upstream 477877 20714083 ~ 20756786 (-) True G112496
TU140949 lncRNA upstream 707963 20944169 ~ 20964562 (-) True AMCG00006813
AMCG00006795 mRNA downstream 182048 20047941 ~ 20053808 (-) True AMCG00006795
AMCG00006789 mRNA downstream 236355 19986747 ~ 19999501 (-) True AMCG00006789
AMCG00006788 mRNA downstream 251419 19982166 ~ 19984437 (-) True AMCG00006788
AMCG00006790 mRNA downstream 254421 19971627 ~ 19981435 (-) True AMCG00006790
AMCG00006785 mRNA downstream 288159 19941057 ~ 19947697 (-) True AMCG00006785
AMCG00006796 mRNA upstream 338591 20574797 ~ 20578476 (-) True AMCG00006796
AMCG00006799 mRNA upstream 376164 20612370 ~ 20617950 (-) True AMCG00006799
AMCG00006800 mRNA upstream 391326 20627532 ~ 20637604 (-) True AMCG00006800
AMCG00006807 mRNA upstream 411668 20647874 ~ 20652624 (-) False AMCG00006807
AMCG00006805 mRNA upstream 420047 20656253 ~ 20666945 (-) True AMCG00006805
TU140642 other downstream 599931 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 1894646 18339270 ~ 18341210 (-) False AMCG00006754
TU140351 other downstream 2602411 17632891 ~ 17633445 (-) True G112059
TU139946 other downstream 4482621 15752821 ~ 15753235 (-) True G111767
TU139783 other downstream 5481886 14725651 ~ 14753970 (-) False G111621
TU140946 other upstream 617851 20854057 ~ 20949836 (-) False AMCG00006813
TU141596 other upstream 3167969 23404175 ~ 23407207 (-) True G113050
TU142176 other upstream 6263809 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 7166394 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 8031056 28267262 ~ 28292598 (-) False G113775

Expression Profile