RNA id: TU141480



Basic Information


Item Value
RNA id TU141480
length 212
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G112953
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22941459 ~ 22941670 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tttcattaagatgctcctctattttctgtctaatcattttttgcaacattttacaggtaatgcaggtgagactgattggtctgtaatttcctggctcagttttgtcccctttcttgtggattggtatgacatttgctgtcttccagtcagttggcacatcccctgttctaagtgtcatttggaatatttgagttagtggcctataaataatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141401 lncRNA downstream 168774 22766273 ~ 22772685 (-) True G112903
TU141373 lncRNA downstream 270576 22669860 ~ 22670883 (-) True G112878
TU141291 lncRNA downstream 683485 22257549 ~ 22257974 (-) True G112809
TU141271 lncRNA downstream 792566 22147790 ~ 22148893 (-) False AMCG00006841
TU141258 lncRNA downstream 883323 22054622 ~ 22058136 (-) True G112783
TU141483 lncRNA upstream 11515 22953185 ~ 22955077 (-) False AMCG00006854
TU141507 lncRNA upstream 212198 23153868 ~ 23154903 (-) True G112979
TU141550 lncRNA upstream 379407 23321077 ~ 23321771 (-) True G113013
TU141551 lncRNA upstream 381263 23322933 ~ 23323151 (-) True G113014
TU141619 lncRNA upstream 606127 23547797 ~ 23554739 (-) True G113066
AMCG00006855 mRNA downstream 13054 22881514 ~ 22928405 (-) True AMCG00006855
AMCG00006847 mRNA downstream 289942 22626401 ~ 22651517 (-) True AMCG00006847
AMCG00006846 mRNA downstream 334076 22592099 ~ 22607383 (-) True AMCG00006846
AMCG00006848 mRNA downstream 351721 22587660 ~ 22589738 (-) True AMCG00006848
AMCG00006845 mRNA downstream 398056 22534401 ~ 22543403 (-) True AMCG00006845
AMCG00006854 mRNA upstream 11506 22953176 ~ 22958306 (-) True AMCG00006854
AMCG00006862 mRNA upstream 345586 23287256 ~ 23302174 (-) True AMCG00006862
AMCG00006864 mRNA upstream 433697 23375367 ~ 23376805 (-) True AMCG00006864
AMCG00006866 mRNA upstream 627214 23568884 ~ 23571133 (-) True AMCG00006866
AMCG00006873 mRNA upstream 689369 23631039 ~ 23752269 (-) True AMCG00006873
TU140946 other downstream 1991623 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 2705253 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 3305534 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 4600249 18339270 ~ 18341210 (-) False AMCG00006754
TU140351 other downstream 5308014 17632891 ~ 17633445 (-) True G112059
TU141596 other upstream 462505 23404175 ~ 23407207 (-) True G113050
TU142176 other upstream 3558345 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 4460930 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 5325592 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 5349785 28291455 ~ 28292598 (-) True G113775

Expression Profile