RNA id: TU141814



Basic Information


Item Value
RNA id TU141814
length 248
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G113233
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 24410057 ~ 24410304 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGCAAACACTAAGTAGCACAACACAGGAATTATGACGTGTTTACATTTTCCCACAGCTGGCATCAGGAATTAGGctgttaataaatatacatcctTAGCTTTTCACAAAACGTTGCCAAGAGTTtgtcattttcttaaaaaaatatttcctgtcCCTGTCAAGTGGTTTGAAAGCAGCTGGATGCATCATATAACACCATCCAGTTCTAACTAAACACTAAactacatacaaaatgtattaaactcaG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141805 lncRNA upstream 37222 24370718 ~ 24372835 (+) True G113224
TU141731 lncRNA upstream 121140 24076753 ~ 24288917 (+) False G113159
TU141732 lncRNA upstream 121140 24076753 ~ 24288917 (+) True G113159
TU141736 lncRNA upstream 152672 24076753 ~ 24257385 (+) False G113159
TU141646 lncRNA upstream 688425 23721382 ~ 23721632 (+) True G113090
TU141872 lncRNA downstream 263321 24673625 ~ 24676576 (+) True G113283
TU141921 lncRNA downstream 832261 25242565 ~ 25260402 (+) True G113319
TU141961 lncRNA downstream 981551 25391855 ~ 25395392 (+) True G113357
TU141962 lncRNA downstream 1010354 25420658 ~ 25420875 (+) True G113358
TU141976 lncRNA downstream 1278431 25688735 ~ 25689111 (+) True G113372
AMCG00006885 mRNA upstream 62694 24337908 ~ 24347363 (+) True AMCG00006885
AMCG00006884 mRNA upstream 74177 24304696 ~ 24335880 (+) True AMCG00006884
AMCG00006878 mRNA upstream 373952 24032089 ~ 24036105 (+) True AMCG00006878
AMCG00006879 mRNA upstream 387414 24018072 ~ 24022643 (+) True AMCG00006879
AMCG00006874 mRNA upstream 488934 23904764 ~ 23921123 (+) True AMCG00006874
AMCG00006888 mRNA downstream 30127 24440431 ~ 24447563 (+) True AMCG00006888
AMCG00006892 mRNA downstream 69714 24480018 ~ 24502346 (+) True AMCG00006892
AMCG00006893 mRNA downstream 99744 24510048 ~ 24520705 (+) True AMCG00006893
AMCG00006894 mRNA downstream 240356 24650660 ~ 24653870 (+) True AMCG00006894
AMCG00006898 mRNA downstream 610826 25021130 ~ 25036473 (+) True AMCG00006898
TU141783 other upstream 74141 24304779 ~ 24335916 (+) False AMCG00006884
TU141703 other upstream 373945 24032113 ~ 24036112 (+) False AMCG00006878
TU141018 other upstream 3206856 21142865 ~ 21203201 (+) True G112600
TU140974 other upstream 3361019 21048336 ~ 21049038 (+) True G112567
TU140941 other upstream 3471887 20937497 ~ 20938170 (+) False AMCG00006811
TU141848 other downstream 98699 24509003 ~ 24587119 (+) False AMCG00006893
TU141973 other downstream 1207763 25618067 ~ 25618445 (+) True G113369
TU142014 other downstream 1404751 25815055 ~ 25832942 (+) True G113400

Expression Profile