RNA id: TU141973



Basic Information


Item Value
RNA id TU141973
length 379
RNA type TUCP
GC content 0.64
exon number 1
gene id G113369
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25618067 ~ 25618445 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCGCAAGGCCGCAGTCTCCTTATCCTTCTGGTCTAGCAGGCTCTCCAGGTGGTGGACATGCATCTCAGCCTCGGCCAGGCGGCGGGTGCGCTCGTGGTCTTCCTCACTGGCCTTGGCCGACAGCCCCTTGCTCTGCAGCATCTCCAGCAGCTTCTTGATGGACTCGTCACGGGCGCTCAGAGTCTGCTTCTGGGTGTCGATGCGCAGCTCCATCTCCTCCAGTGTCTTGCGCAGCAGGAAGAGCTCCTTGGCCTGGCGCTCGTGCTCGCTATGCAGCCGTTGGAAGTTCTCCTCCGTCAGCTCGGAGGCCAGGGGCTCACTGGGCCGGCTGCTGCTGTCCTGCTGGAAGAGCTGGTTGAGGTCGCGCTGTATGCGCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141962 lncRNA upstream 197192 25420658 ~ 25420875 (+) True G113358
TU141961 lncRNA upstream 222675 25391855 ~ 25395392 (+) True G113357
TU141921 lncRNA upstream 357665 25242565 ~ 25260402 (+) True G113319
TU141872 lncRNA upstream 941491 24673625 ~ 24676576 (+) True G113283
TU141814 lncRNA upstream 1207763 24410057 ~ 24410304 (+) True G113233
TU141976 lncRNA downstream 70290 25688735 ~ 25689111 (+) True G113372
TU141977 lncRNA downstream 78752 25697197 ~ 25697408 (+) True G113373
TU141987 lncRNA downstream 104436 25722881 ~ 25724671 (+) True G113383
TU141999 lncRNA downstream 122538 25740983 ~ 25745859 (+) True G113394
TU142028 lncRNA downstream 274212 25892657 ~ 25894634 (+) True G113409
AMCG00006905 mRNA upstream 278009 25336345 ~ 25340058 (+) True AMCG00006905
AMCG00006903 mRNA upstream 403707 25156086 ~ 25214360 (+) True AMCG00006903
AMCG00006901 mRNA upstream 503728 25078387 ~ 25114339 (+) True AMCG00006901
AMCG00006899 mRNA upstream 576109 25040592 ~ 25041958 (+) True AMCG00006899
AMCG00006898 mRNA upstream 581594 25021130 ~ 25036473 (+) True AMCG00006898
AMCG00006910 mRNA downstream 97382 25715827 ~ 25721613 (+) True AMCG00006910
AMCG00006916 mRNA downstream 192118 25810563 ~ 25822470 (+) True AMCG00006916
AMCG00006912 mRNA downstream 211029 25829474 ~ 25836610 (+) True AMCG00006912
AMCG00006911 mRNA downstream 232960 25851405 ~ 25861865 (+) True AMCG00006911
AMCG00006917 mRNA downstream 293910 25912355 ~ 25937570 (+) True AMCG00006917
TU141848 other upstream 1030948 24509003 ~ 24587119 (+) False AMCG00006893
TU141783 other upstream 1282151 24304779 ~ 24335916 (+) False AMCG00006884
TU141703 other upstream 1581955 24032113 ~ 24036112 (+) False AMCG00006878
TU141018 other upstream 4414866 21142865 ~ 21203201 (+) True G112600
TU140974 other upstream 4569029 21048336 ~ 21049038 (+) True G112567
TU142014 other downstream 196610 25815055 ~ 25832942 (+) True G113400

Expression Profile