RNA id: TU141994


Basic Information

Item Value
RNA id TU141994
length 376
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G113390
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25718417 ~ 25718792 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATATCTTGCAGACCACAGTAGTGTTGCACCAAATGATTAGTTTCTTCCAGAATAAAAATGATCTCTTTCCAAACTAGGGTATTCAGAATCCTAGTTCTGATTACTTTCAGAATGTAATCTTTACAAAATGAAGTGTAGTATTTTCTTTACCAGTTTTTCTTGGGCTTGCTGTAGCTGGAAGTCAGTTATGTCCTTGATCTCCTCAGGCCTCAGGCCTTTCCAGTGATCAGGTCGAACGCGCTGTGGTCCCAACACACTTATGGCCTGGTCAGGGTTCTCAGACAACAAGTCTCCCTGAAGGAGGTTTAAGATTTCCACCCGGTTATCTTCTTCTTCCTGCTGTTTCTCCAGTTTCCTTTTCTCTGCAGTTTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141993 lncRNA downstream 1430 25716525 ~ 25716987 (-) True G113389
TU141979 lncRNA downstream 319719 25395536 ~ 25398698 (-) True G113375
TU141978 lncRNA downstream 326099 25391796 ~ 25392318 (-) True G113374
TU141891 lncRNA downstream 1044919 24671788 ~ 24673498 (-) True G113301
TU141806 lncRNA downstream 1342488 24373692 ~ 24375929 (-) True G113225
TU141995 lncRNA upstream 570 25719362 ~ 25719575 (-) True G113391
TU141998 lncRNA upstream 19762 25738554 ~ 25738867 (-) True G113393
TU142000 lncRNA upstream 22276 25741068 ~ 25745985 (-) True G113395
TU142003 lncRNA upstream 22276 25741068 ~ 25745490 (-) False G113395
TU142052 lncRNA upstream 147593 25866385 ~ 25867279 (-) True G113431
AMCG00006909 mRNA downstream 46674 25545313 ~ 25671743 (-) True AMCG00006909
AMCG00006908 mRNA downstream 200094 25516575 ~ 25518323 (-) True AMCG00006908
AMCG00006907 mRNA downstream 270005 25400710 ~ 25448412 (-) True AMCG00006907
AMCG00006906 mRNA downstream 404976 25309625 ~ 25313441 (-) True AMCG00006906
AMCG00006904 mRNA downstream 459850 25242554 ~ 25258567 (-) True AMCG00006904
AMCG00006913 mRNA upstream 6447 25725239 ~ 25735881 (-) True AMCG00006913
AMCG00006914 mRNA upstream 28344 25747136 ~ 25778618 (-) True AMCG00006914
AMCG00006915 mRNA upstream 119963 25838755 ~ 25847485 (-) True AMCG00006915
AMCG00006920 mRNA upstream 169465 25888257 ~ 25893080 (-) True AMCG00006920
AMCG00006919 mRNA upstream 180759 25899551 ~ 25911582 (-) True AMCG00006919
TU141596 other downstream 2311210 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 4768581 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 5482211 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 6082492 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 7377207 18339270 ~ 18341210 (-) False AMCG00006754
TU142176 other upstream 781223 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 1683808 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 2548470 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 2572663 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 2992427 28711219 ~ 28812548 (-) True G113833

Expression Profile