RNA id: TU141995


Basic Information

Item Value
RNA id TU141995
length 214
lncRNA type inter_gene
GC content 0.63
exon number 1
gene id G113391
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25719362 ~ 25719575 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGACAATTTATTGCATTGGCAGAGCCACTAGCAGGCCCTCCCTGGCACACTCACTGGGCTCGGTGCTGCTCAGAGAGCTGGGCGTTGATGTTGTCCTGGGCCCGGCGCAGCTGTCTGTTGAGTCTGGCCTGCTGGCGCTCATGGAGCAGGGCGGCACGGGCAGAGCTCATCTGGTAGCGGTCCCACTCCCGATCACACTCCTGCTCCTGCGCTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141994 lncRNA downstream 570 25718417 ~ 25718792 (-) True G113390
TU141993 lncRNA downstream 2375 25716525 ~ 25716987 (-) True G113389
TU141979 lncRNA downstream 320664 25395536 ~ 25398698 (-) True G113375
TU141978 lncRNA downstream 327044 25391796 ~ 25392318 (-) True G113374
TU141891 lncRNA downstream 1045864 24671788 ~ 24673498 (-) True G113301
TU141998 lncRNA upstream 18979 25738554 ~ 25738867 (-) True G113393
TU142000 lncRNA upstream 21493 25741068 ~ 25745985 (-) True G113395
TU142003 lncRNA upstream 21493 25741068 ~ 25745490 (-) False G113395
TU142052 lncRNA upstream 146810 25866385 ~ 25867279 (-) True G113431
TU142099 lncRNA upstream 276066 25995641 ~ 25995929 (-) True G113468
AMCG00006909 mRNA downstream 47619 25545313 ~ 25671743 (-) True AMCG00006909
AMCG00006908 mRNA downstream 201039 25516575 ~ 25518323 (-) True AMCG00006908
AMCG00006907 mRNA downstream 270950 25400710 ~ 25448412 (-) True AMCG00006907
AMCG00006906 mRNA downstream 405921 25309625 ~ 25313441 (-) True AMCG00006906
AMCG00006904 mRNA downstream 460795 25242554 ~ 25258567 (-) True AMCG00006904
AMCG00006913 mRNA upstream 5664 25725239 ~ 25735881 (-) True AMCG00006913
AMCG00006914 mRNA upstream 27561 25747136 ~ 25778618 (-) True AMCG00006914
AMCG00006915 mRNA upstream 119180 25838755 ~ 25847485 (-) True AMCG00006915
AMCG00006920 mRNA upstream 168682 25888257 ~ 25893080 (-) True AMCG00006920
AMCG00006919 mRNA upstream 179976 25899551 ~ 25911582 (-) True AMCG00006919
TU141596 other downstream 2312155 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 4769526 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 5483156 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 6083437 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 7378152 18339270 ~ 18341210 (-) False AMCG00006754
TU142176 other upstream 780440 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 1683025 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 2547687 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 2571880 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 2991644 28711219 ~ 28812548 (-) True G113833

Expression Profile