RNA id: TU142098



Basic Information


Item Value
RNA id TU142098
length 266
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G113467
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25995644 ~ 25995909 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaatcggcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccaatccaacagaggagctactgtagctcaaattgctgaaaaagttaatgctggttctgatagaaaggtgtcagaacacacagtgcatcacagttttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142028 lncRNA upstream 101010 25892657 ~ 25894634 (+) True G113409
TU141999 lncRNA upstream 249785 25740983 ~ 25745859 (+) True G113394
TU141987 lncRNA upstream 270973 25722881 ~ 25724671 (+) True G113383
TU141977 lncRNA upstream 298236 25697197 ~ 25697408 (+) True G113373
TU141976 lncRNA upstream 306533 25688735 ~ 25689111 (+) True G113372
TU142100 lncRNA downstream 138 25996047 ~ 25996264 (+) True G113469
TU142180 lncRNA downstream 558778 26554687 ~ 26554909 (+) True G113534
TU142183 lncRNA downstream 611750 26607659 ~ 26640179 (+) True G113537
TU142196 lncRNA downstream 648847 26644756 ~ 26645011 (+) True G113541
TU142198 lncRNA downstream 654842 26650751 ~ 26651028 (+) True G113543
AMCG00006921 mRNA upstream 23532 25949686 ~ 25972112 (+) True AMCG00006921
AMCG00006917 mRNA upstream 58074 25912355 ~ 25937570 (+) True AMCG00006917
AMCG00006911 mRNA upstream 133779 25851405 ~ 25861865 (+) True AMCG00006911
AMCG00006912 mRNA upstream 159034 25829474 ~ 25836610 (+) True AMCG00006912
AMCG00006916 mRNA upstream 173174 25810563 ~ 25822470 (+) True AMCG00006916
AMCG00006927 mRNA downstream 200408 26196317 ~ 26203741 (+) True AMCG00006927
AMCG00006928 mRNA downstream 238943 26234852 ~ 26260252 (+) True AMCG00006928
AMCG00006930 mRNA downstream 708871 26704780 ~ 26706164 (+) True AMCG00006930
AMCG00006931 mRNA downstream 774617 26770526 ~ 26770852 (+) True AMCG00006931
AMCG00006933 mRNA downstream 1328324 27324233 ~ 27325720 (+) True AMCG00006933
TU142014 other upstream 162702 25815055 ~ 25832942 (+) True G113400
TU141973 other upstream 377199 25618067 ~ 25618445 (+) True G113369
TU141848 other upstream 1408525 24509003 ~ 24587119 (+) False AMCG00006893
TU141783 other upstream 1659728 24304779 ~ 24335916 (+) False AMCG00006884
TU141703 other upstream 1959532 24032113 ~ 24036112 (+) False AMCG00006878

Expression Profile