RNA id: TU142232



Basic Information


Item Value
RNA id TU142232
length 225
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G113572
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27059370 ~ 27059594 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tcctcaatttgctaagttttggtacaaatttctcctgagcctcaagtagtatattcttaaaatatacccatccattttcaactgaatctgtatccagtgtgctccagtctacctcttctaaatgccgcctcataccttcaaggtttgcttttctaaaattgtagaccattgttttagacttggaccttgttttttgaaagaatgcctcaaagctaaccatattgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142224 lncRNA upstream 81260 26977909 ~ 26978110 (+) True G113564
TU142217 lncRNA upstream 92134 26966793 ~ 26967236 (+) True G113557
TU142216 lncRNA upstream 93575 26964348 ~ 26965795 (+) True G113556
TU142211 lncRNA upstream 246149 26812733 ~ 26813221 (+) True G113551
TU142201 lncRNA upstream 353902 26705236 ~ 26705468 (+) True G113546
TU142234 lncRNA downstream 2918 27062512 ~ 27062845 (+) True G113574
TU142245 lncRNA downstream 95941 27155535 ~ 27155862 (+) True G113585
TU142252 lncRNA downstream 201016 27260610 ~ 27261072 (+) True G113592
TU142255 lncRNA downstream 202637 27262231 ~ 27283320 (+) True G113594
TU142258 lncRNA downstream 209377 27268971 ~ 27363044 (+) True G113596
AMCG00006931 mRNA upstream 288518 26770526 ~ 26770852 (+) True AMCG00006931
AMCG00006930 mRNA upstream 353206 26704780 ~ 26706164 (+) True AMCG00006930
AMCG00006928 mRNA upstream 799118 26234852 ~ 26260252 (+) True AMCG00006928
AMCG00006927 mRNA upstream 855629 26196317 ~ 26203741 (+) True AMCG00006927
AMCG00006921 mRNA upstream 1087258 25949686 ~ 25972112 (+) True AMCG00006921
AMCG00006933 mRNA downstream 264639 27324233 ~ 27325720 (+) True AMCG00006933
AMCG00006936 mRNA downstream 556541 27616135 ~ 27627333 (+) True AMCG00006936
AMCG00006937 mRNA downstream 751591 27811185 ~ 27831056 (+) True AMCG00006937
AMCG00006950 mRNA downstream 849612 27909206 ~ 27910398 (+) True AMCG00006950
AMCG00006942 mRNA downstream 854706 27914300 ~ 27935789 (+) True AMCG00006942
TU142014 other upstream 1226428 25815055 ~ 25832942 (+) True G113400
TU141973 other upstream 1440925 25618067 ~ 25618445 (+) True G113369
TU141848 other upstream 2472251 24509003 ~ 24587119 (+) False AMCG00006893
TU141783 other upstream 2723454 24304779 ~ 24335916 (+) False AMCG00006884
TU141703 other upstream 3023258 24032113 ~ 24036112 (+) False AMCG00006878

Expression Profile